bamsignals 1.5.3
Alessandro Mammana
| Snapshot Date: 2016-09-19 19:15:14 -0700 (Mon, 19 Sep 2016) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/bamsignals | | Last Changed Rev: 117851 / Revision: 121152 | | Last Changed Date: 2016-05-25 11:10:26 -0700 (Wed, 25 May 2016) |
| zin1 | Linux (Ubuntu 16.04 LTS) / x86_64 | OK | OK | OK | |  |
| moscato1 | Windows Server 2008 R2 Standard (64-bit) / x64 | [ OK ] | OK | OK | OK | |
| morelia | Mac OS X Mavericks (10.9.5) / x86_64 | OK | OK | OK | OK | |
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### Running command:
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### rm -rf bamsignals.buildbin-libdir && mkdir bamsignals.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.4/bioc/src/contrib/bamsignals_1.5.3.tar.gz && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --library=bamsignals.buildbin-libdir --merge-multiarch bamsignals_1.5.3.tar.gz && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL bamsignals_1.5.3.zip && rm bamsignals_1.5.3.tar.gz bamsignals_1.5.3.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
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0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 2365k 100 2365k 0 0 89.9M 0 --:--:-- --:--:-- --:--:-- 110M
install for i386
* installing *source* package 'bamsignals' ...
** libs
C:/Rtools/mingw_32/bin/g++ -I"D:/biocbld/BBS-3˜1.4-B/R/include" -DNDEBUG -I"D:/biocbld/bbs-3.4-bioc/R/library/Rcpp/include" -I"D:/biocbld/bbs-3.4-bioc/R/library/Rhtslib/include" -I"D:/biocbld/bbs-3.4-bioc/R/library/zlibbioc/include" -I"c:/local323/include" -O2 -Wall -mtune=core2 -c CountSignals.cpp -o CountSignals.o
C:/Rtools/mingw_32/bin/g++ -I"D:/biocbld/BBS-3˜1.4-B/R/include" -DNDEBUG -I"D:/biocbld/bbs-3.4-bioc/R/library/Rcpp/include" -I"D:/biocbld/bbs-3.4-bioc/R/library/Rhtslib/include" -I"D:/biocbld/bbs-3.4-bioc/R/library/zlibbioc/include" -I"c:/local323/include" -O2 -Wall -mtune=core2 -c RcppExports.cpp -o RcppExports.o
C:/Rtools/mingw_32/bin/g++ -I"D:/biocbld/BBS-3˜1.4-B/R/include" -DNDEBUG -I"D:/biocbld/bbs-3.4-bioc/R/library/Rcpp/include" -I"D:/biocbld/bbs-3.4-bioc/R/library/Rhtslib/include" -I"D:/biocbld/bbs-3.4-bioc/R/library/zlibbioc/include" -I"c:/local323/include" -O2 -Wall -mtune=core2 -c bamsignals.cpp -o bamsignals.o
C:/Rtools/mingw_32/bin/gcc -I"D:/biocbld/BBS-3˜1.4-B/R/include" -DNDEBUG -I"D:/biocbld/bbs-3.4-bioc/R/library/Rcpp/include" -I"D:/biocbld/bbs-3.4-bioc/R/library/Rhtslib/include" -I"D:/biocbld/bbs-3.4-bioc/R/library/zlibbioc/include" -I"c:/local323/include" -O3 -Wall -std=gnu99 -mtune=core2 -c bamsignals_init.c -o bamsignals_init.o
C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o bamsignals.dll tmp.def CountSignals.o RcppExports.o bamsignals.o bamsignals_init.o -LD:/biocbld/bbs-3.4-bioc/R/library/Rhtslib/lib/i386 -lhts -lz -pthread -lws2_32 -Lc:/local323/lib/i386 -Lc:/local323/lib -LD:/biocbld/BBS-3˜1.4-B/R/bin/i386 -lR
installing to D:/biocbld/bbs-3.4-bioc/meat/bamsignals.buildbin-libdir/bamsignals/libs/i386
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
install for x64
* installing *source* package 'bamsignals' ...
** libs
C:/Rtools/mingw_64/bin/g++ -I"D:/biocbld/BBS-3˜1.4-B/R/include" -DNDEBUG -I"D:/biocbld/bbs-3.4-bioc/R/library/Rcpp/include" -I"D:/biocbld/bbs-3.4-bioc/R/library/Rhtslib/include" -I"D:/biocbld/bbs-3.4-bioc/R/library/zlibbioc/include" -I"c:/local323/include" -O2 -Wall -mtune=core2 -c CountSignals.cpp -o CountSignals.o
C:/Rtools/mingw_64/bin/g++ -I"D:/biocbld/BBS-3˜1.4-B/R/include" -DNDEBUG -I"D:/biocbld/bbs-3.4-bioc/R/library/Rcpp/include" -I"D:/biocbld/bbs-3.4-bioc/R/library/Rhtslib/include" -I"D:/biocbld/bbs-3.4-bioc/R/library/zlibbioc/include" -I"c:/local323/include" -O2 -Wall -mtune=core2 -c RcppExports.cpp -o RcppExports.o
C:/Rtools/mingw_64/bin/g++ -I"D:/biocbld/BBS-3˜1.4-B/R/include" -DNDEBUG -I"D:/biocbld/bbs-3.4-bioc/R/library/Rcpp/include" -I"D:/biocbld/bbs-3.4-bioc/R/library/Rhtslib/include" -I"D:/biocbld/bbs-3.4-bioc/R/library/zlibbioc/include" -I"c:/local323/include" -O2 -Wall -mtune=core2 -c bamsignals.cpp -o bamsignals.o
C:/Rtools/mingw_64/bin/gcc -I"D:/biocbld/BBS-3˜1.4-B/R/include" -DNDEBUG -I"D:/biocbld/bbs-3.4-bioc/R/library/Rcpp/include" -I"D:/biocbld/bbs-3.4-bioc/R/library/Rhtslib/include" -I"D:/biocbld/bbs-3.4-bioc/R/library/zlibbioc/include" -I"c:/local323/include" -O2 -Wall -std=gnu99 -mtune=core2 -c bamsignals_init.c -o bamsignals_init.o
C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o bamsignals.dll tmp.def CountSignals.o RcppExports.o bamsignals.o bamsignals_init.o -LD:/biocbld/bbs-3.4-bioc/R/library/Rhtslib/lib/x64 -lhts -lz -pthread -lws2_32 -Lc:/local323/lib/x64 -Lc:/local323/lib -LD:/biocbld/BBS-3˜1.4-B/R/bin/x64 -lR
installing to D:/biocbld/bbs-3.4-bioc/meat/bamsignals.buildbin-libdir/bamsignals/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'bamsignals' as bamsignals_1.5.3.zip
* DONE (bamsignals)
* installing to library 'D:/biocbld/bbs-3.4-bioc/R/library'
package 'bamsignals' successfully unpacked and MD5 sums checked