| Back to Multiple platform build/check report for BioC 3.24: simplified long |
|
This page was generated on 2026-05-06 11:33 -0400 (Wed, 06 May 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.4 LTS) | x86_64 | 4.6.0 RC (2026-04-17 r89917) -- "Because it was There" | 4878 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4663 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1007/2366 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| HPiP 1.19.0 (landing page) Matineh Rahmatbakhsh
| nebbiolo2 | Linux (Ubuntu 24.04.4 LTS) / x86_64 | OK | OK | OK | |||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | OK | ||||||||||
| See other builds for HPiP in R Universe. | ||||||||||||||
|
To the developers/maintainers of the HPiP package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HPiP.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: HPiP |
| Version: 1.19.0 |
| Command: /home/biocbuild/bbs-3.24-bioc/R/bin/R CMD check --install=check:HPiP.install-out.txt --library=/home/biocbuild/bbs-3.24-bioc/R/site-library --timings HPiP_1.19.0.tar.gz |
| StartedAt: 2026-05-06 00:43:55 -0400 (Wed, 06 May 2026) |
| EndedAt: 2026-05-06 00:59:00 -0400 (Wed, 06 May 2026) |
| EllapsedTime: 905.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: HPiP.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.24-bioc/R/bin/R CMD check --install=check:HPiP.install-out.txt --library=/home/biocbuild/bbs-3.24-bioc/R/site-library --timings HPiP_1.19.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.24-bioc/meat/HPiP.Rcheck’
* using R version 4.6.0 RC (2026-04-17 r89917)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
* running under: Ubuntu 24.04.4 LTS
* using session charset: UTF-8
* current time: 2026-05-06 04:43:55 UTC
* checking for file ‘HPiP/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘HPiP’ version ‘1.19.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘HPiP’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... NOTE
License stub is invalid DCF.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) getHPI.Rd:29: Lost braces
29 | then the Kronecker product is the code{(pm × qn)} block matrix
| ^
* checking Rd metadata ... OK
* checking Rd cross-references ... INFO
Package unavailable to check Rd xrefs: ‘ftrCOOL’
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking R/sysdata.rda ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
var_imp 36.228 0.454 36.883
FSmethod 34.086 0.469 34.558
corr_plot 34.085 0.384 34.511
pred_ensembel 12.870 0.084 11.632
enrichfindP 0.547 0.038 15.197
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘runTests.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/home/biocbuild/bbs-3.24-bioc/meat/HPiP.Rcheck/00check.log’
for details.
HPiP.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.24-bioc/R/bin/R CMD INSTALL HPiP ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.24-bioc/R/site-library’ * installing *source* package ‘HPiP’ ... ** this is package ‘HPiP’ version ‘1.19.0’ ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HPiP)
HPiP.Rcheck/tests/runTests.Rout
R version 4.6.0 RC (2026-04-17 r89917) -- "Because it was There"
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> BiocGenerics:::testPackage('HPiP')
No results to show
Please make sure that the organism is correct or set significant = FALSE
No results to show
Please make sure that the organism is correct or set significant = FALSE
No results to show
Please make sure that the organism is correct or set significant = FALSE
No results to show
Please make sure that the organism is correct or set significant = FALSE
No results to show
Please make sure that the organism is correct or set significant = FALSE
No results to show
Please make sure that the organism is correct or set significant = FALSE
No results to show
Please make sure that the organism is correct or set significant = FALSE
No results to show
Please make sure that the organism is correct or set significant = FALSE
avNNet
Loading required package: ggplot2
Loading required package: lattice
Fitting Repeat 1
# weights: 103
initial value 97.118999
final value 94.052910
converged
Fitting Repeat 2
# weights: 103
initial value 99.397092
final value 94.052910
converged
Fitting Repeat 3
# weights: 103
initial value 99.728681
final value 94.052910
converged
Fitting Repeat 4
# weights: 103
initial value 99.062894
final value 94.052910
converged
Fitting Repeat 5
# weights: 103
initial value 94.605010
final value 94.052910
converged
Fitting Repeat 1
# weights: 305
initial value 101.013429
iter 10 value 94.043953
iter 20 value 93.819421
final value 93.818716
converged
Fitting Repeat 2
# weights: 305
initial value 98.166124
final value 94.052910
converged
Fitting Repeat 3
# weights: 305
initial value 101.532522
final value 94.052910
converged
Fitting Repeat 4
# weights: 305
initial value 101.660383
final value 93.991525
converged
Fitting Repeat 5
# weights: 305
initial value 111.200827
final value 94.052911
converged
Fitting Repeat 1
# weights: 507
initial value 100.914913
iter 10 value 92.345745
final value 92.244445
converged
Fitting Repeat 2
# weights: 507
initial value 108.920080
final value 94.052910
converged
Fitting Repeat 3
# weights: 507
initial value 110.085566
final value 94.032967
converged
Fitting Repeat 4
# weights: 507
initial value 100.037860
iter 10 value 93.969045
final value 93.969040
converged
Fitting Repeat 5
# weights: 507
initial value 101.928566
final value 94.052910
converged
Fitting Repeat 1
# weights: 103
initial value 98.310414
iter 10 value 94.064140
iter 20 value 93.226060
iter 30 value 89.264249
iter 40 value 87.683148
iter 50 value 86.411181
iter 60 value 85.874393
iter 70 value 85.758977
iter 80 value 85.741965
final value 85.738928
converged
Fitting Repeat 2
# weights: 103
initial value 110.756160
iter 10 value 93.706873
iter 20 value 90.038457
iter 30 value 87.674205
iter 40 value 86.520851
iter 50 value 85.870645
iter 60 value 84.339832
iter 70 value 84.265634
iter 80 value 84.220583
iter 90 value 84.054980
iter 100 value 84.023029
final value 84.023029
stopped after 100 iterations
Fitting Repeat 3
# weights: 103
initial value 97.799270
iter 10 value 86.711413
iter 20 value 84.779909
iter 30 value 83.405875
iter 40 value 81.872265
iter 50 value 81.492811
iter 60 value 81.358180
iter 70 value 81.199193
final value 81.191265
converged
Fitting Repeat 4
# weights: 103
initial value 100.687889
iter 10 value 94.056825
iter 20 value 93.825386
iter 30 value 87.117300
iter 40 value 85.187640
iter 50 value 84.820815
iter 60 value 84.741124
iter 70 value 84.459991
iter 80 value 83.915283
iter 90 value 83.811544
iter 100 value 83.770947
final value 83.770947
stopped after 100 iterations
Fitting Repeat 5
# weights: 103
initial value 100.357155
iter 10 value 95.467088
iter 20 value 94.049232
iter 30 value 90.398624
iter 40 value 88.449574
iter 50 value 85.741204
iter 60 value 83.136808
iter 70 value 82.055724
iter 80 value 81.872132
iter 90 value 81.541612
iter 100 value 81.438716
final value 81.438716
stopped after 100 iterations
Fitting Repeat 1
# weights: 305
initial value 101.814249
iter 10 value 94.114076
iter 20 value 93.380086
iter 30 value 87.349017
iter 40 value 86.415580
iter 50 value 83.883936
iter 60 value 80.954520
iter 70 value 80.227766
iter 80 value 79.970478
iter 90 value 79.910538
iter 100 value 79.892037
final value 79.892037
stopped after 100 iterations
Fitting Repeat 2
# weights: 305
initial value 107.061815
iter 10 value 94.193259
iter 20 value 91.657431
iter 30 value 88.773362
iter 40 value 84.800605
iter 50 value 84.077607
iter 60 value 81.340153
iter 70 value 80.508505
iter 80 value 80.105061
iter 90 value 80.029603
iter 100 value 79.967256
final value 79.967256
stopped after 100 iterations
Fitting Repeat 3
# weights: 305
initial value 104.215236
iter 10 value 95.310179
iter 20 value 88.838339
iter 30 value 87.632468
iter 40 value 85.256167
iter 50 value 83.636562
iter 60 value 82.691587
iter 70 value 81.630475
iter 80 value 81.283761
iter 90 value 81.064139
iter 100 value 80.982387
final value 80.982387
stopped after 100 iterations
Fitting Repeat 4
# weights: 305
initial value 107.253587
iter 10 value 94.049444
iter 20 value 93.769145
iter 30 value 93.551218
iter 40 value 87.329788
iter 50 value 84.048500
iter 60 value 82.759936
iter 70 value 81.367254
iter 80 value 80.934543
iter 90 value 80.777002
iter 100 value 80.627475
final value 80.627475
stopped after 100 iterations
Fitting Repeat 5
# weights: 305
initial value 102.388843
iter 10 value 94.136100
iter 20 value 94.060190
iter 30 value 93.885181
iter 40 value 88.460148
iter 50 value 84.373439
iter 60 value 83.559828
iter 70 value 83.241944
iter 80 value 82.859792
iter 90 value 81.567550
iter 100 value 80.981471
final value 80.981471
stopped after 100 iterations
Fitting Repeat 1
# weights: 507
initial value 110.245057
iter 10 value 94.791192
iter 20 value 88.348033
iter 30 value 86.612209
iter 40 value 84.684522
iter 50 value 83.138126
iter 60 value 81.339024
iter 70 value 80.990881
iter 80 value 80.723791
iter 90 value 80.631941
iter 100 value 80.612088
final value 80.612088
stopped after 100 iterations
Fitting Repeat 2
# weights: 507
initial value 109.816266
iter 10 value 94.071610
iter 20 value 89.579680
iter 30 value 85.307412
iter 40 value 83.980284
iter 50 value 82.508016
iter 60 value 82.002513
iter 70 value 81.207643
iter 80 value 80.462989
iter 90 value 80.206082
iter 100 value 80.008365
final value 80.008365
stopped after 100 iterations
Fitting Repeat 3
# weights: 507
initial value 105.280541
iter 10 value 94.301330
iter 20 value 92.762928
iter 30 value 89.914208
iter 40 value 82.325836
iter 50 value 81.134570
iter 60 value 80.914919
iter 70 value 80.789285
iter 80 value 80.519959
iter 90 value 80.467578
iter 100 value 80.446785
final value 80.446785
stopped after 100 iterations
Fitting Repeat 4
# weights: 507
initial value 125.457052
iter 10 value 93.941992
iter 20 value 93.798160
iter 30 value 88.698965
iter 40 value 85.905894
iter 50 value 82.430625
iter 60 value 81.521084
iter 70 value 81.350518
iter 80 value 80.828686
iter 90 value 80.536411
iter 100 value 80.285774
final value 80.285774
stopped after 100 iterations
Fitting Repeat 5
# weights: 507
initial value 106.014032
iter 10 value 94.013542
iter 20 value 86.358096
iter 30 value 86.051429
iter 40 value 85.839423
iter 50 value 84.742672
iter 60 value 83.886087
iter 70 value 83.777871
iter 80 value 83.483155
iter 90 value 83.390541
iter 100 value 83.341144
final value 83.341144
stopped after 100 iterations
Fitting Repeat 1
# weights: 103
initial value 96.214708
final value 94.054581
converged
Fitting Repeat 2
# weights: 103
initial value 106.106981
final value 94.054591
converged
Fitting Repeat 3
# weights: 103
initial value 97.105611
final value 94.054560
converged
Fitting Repeat 4
# weights: 103
initial value 108.083168
iter 10 value 94.054411
iter 20 value 94.052969
iter 30 value 94.030806
iter 40 value 93.370798
iter 50 value 91.641480
iter 60 value 91.558621
iter 70 value 91.557071
final value 91.557058
converged
Fitting Repeat 5
# weights: 103
initial value 95.680500
final value 93.970378
converged
Fitting Repeat 1
# weights: 305
initial value 99.474656
iter 10 value 93.974134
iter 20 value 93.855386
iter 30 value 93.805406
iter 40 value 93.805278
final value 93.805231
converged
Fitting Repeat 2
# weights: 305
initial value 100.797521
iter 10 value 94.058153
iter 20 value 94.026204
iter 30 value 87.243975
iter 40 value 86.993904
final value 86.993834
converged
Fitting Repeat 3
# weights: 305
initial value 95.288774
iter 10 value 94.057387
iter 20 value 89.726199
iter 30 value 86.999907
iter 40 value 86.946226
iter 50 value 86.866122
iter 60 value 86.864958
final value 86.864821
converged
Fitting Repeat 4
# weights: 305
initial value 109.599382
iter 10 value 92.448071
iter 20 value 86.439366
final value 86.438274
converged
Fitting Repeat 5
# weights: 305
initial value 103.002414
iter 10 value 94.038270
iter 20 value 94.033344
final value 94.033313
converged
Fitting Repeat 1
# weights: 507
initial value 129.004459
iter 10 value 94.064145
iter 20 value 94.056544
iter 30 value 93.450226
iter 40 value 86.243641
iter 50 value 85.723754
iter 60 value 85.027904
iter 70 value 84.356398
iter 80 value 82.462766
iter 90 value 81.797322
iter 100 value 81.539934
final value 81.539934
stopped after 100 iterations
Fitting Repeat 2
# weights: 507
initial value 96.804787
iter 10 value 93.819680
iter 20 value 93.813974
iter 30 value 93.734561
iter 40 value 93.733971
final value 93.733948
converged
Fitting Repeat 3
# weights: 507
initial value 102.772803
iter 10 value 94.041962
iter 20 value 94.033992
iter 30 value 92.356529
iter 40 value 85.200020
iter 50 value 81.883536
iter 60 value 81.766163
iter 70 value 81.764156
iter 80 value 81.762743
iter 90 value 81.758717
iter 100 value 81.591599
final value 81.591599
stopped after 100 iterations
Fitting Repeat 4
# weights: 507
initial value 115.667130
iter 10 value 94.062770
iter 20 value 94.010037
iter 30 value 85.250870
iter 40 value 84.925373
iter 50 value 84.910256
iter 60 value 84.054090
iter 70 value 83.953356
iter 80 value 83.942642
iter 90 value 83.906667
iter 100 value 83.903903
final value 83.903903
stopped after 100 iterations
Fitting Repeat 5
# weights: 507
initial value 111.621524
iter 10 value 94.041194
iter 20 value 93.549940
iter 30 value 86.884287
iter 40 value 86.011419
iter 50 value 85.040428
iter 60 value 85.021790
iter 70 value 85.000085
iter 80 value 84.971730
final value 84.971612
converged
Fitting Repeat 1
# weights: 103
initial value 95.447024
final value 94.484211
converged
Fitting Repeat 2
# weights: 103
initial value 99.836191
final value 94.484211
converged
Fitting Repeat 3
# weights: 103
initial value 95.061398
final value 94.484211
converged
Fitting Repeat 4
# weights: 103
initial value 97.051572
final value 94.484211
converged
Fitting Repeat 5
# weights: 103
initial value 96.594311
final value 94.484211
converged
Fitting Repeat 1
# weights: 305
initial value 98.171025
iter 10 value 93.394941
final value 93.394928
converged
Fitting Repeat 2
# weights: 305
initial value 96.004102
iter 10 value 93.659480
iter 10 value 93.659479
iter 10 value 93.659479
final value 93.659479
converged
Fitting Repeat 3
# weights: 305
initial value 98.922448
iter 10 value 90.179851
iter 20 value 89.176650
final value 89.175000
converged
Fitting Repeat 4
# weights: 305
initial value 100.626656
iter 10 value 93.394932
final value 93.394928
converged
Fitting Repeat 5
# weights: 305
initial value 99.903563
iter 10 value 93.394928
iter 10 value 93.394928
iter 10 value 93.394928
final value 93.394928
converged
Fitting Repeat 1
# weights: 507
initial value 116.019220
final value 94.484211
converged
Fitting Repeat 2
# weights: 507
initial value 94.491175
iter 10 value 85.294664
iter 20 value 84.773626
final value 84.773447
converged
Fitting Repeat 3
# weights: 507
initial value 107.603587
final value 94.484211
converged
Fitting Repeat 4
# weights: 507
initial value 122.228517
final value 94.484211
converged
Fitting Repeat 5
# weights: 507
initial value 104.499252
iter 10 value 94.443189
final value 94.443182
converged
Fitting Repeat 1
# weights: 103
initial value 101.736471
iter 10 value 93.604527
iter 20 value 93.375663
iter 30 value 87.878848
iter 40 value 87.006017
iter 50 value 81.761415
iter 60 value 80.371493
iter 70 value 80.223255
final value 80.223253
converged
Fitting Repeat 2
# weights: 103
initial value 97.704674
iter 10 value 94.488551
iter 20 value 91.361639
iter 30 value 85.695786
iter 40 value 83.929918
iter 50 value 82.978059
iter 60 value 82.908409
iter 70 value 82.907858
iter 70 value 82.907858
iter 70 value 82.907858
final value 82.907858
converged
Fitting Repeat 3
# weights: 103
initial value 96.877008
iter 10 value 94.449133
iter 20 value 91.963955
iter 30 value 86.282815
iter 40 value 85.134833
iter 50 value 83.332263
iter 60 value 82.910755
iter 70 value 82.910084
final value 82.907858
converged
Fitting Repeat 4
# weights: 103
initial value 97.369815
iter 10 value 93.939013
iter 20 value 93.743244
iter 30 value 87.283907
iter 40 value 83.677016
iter 50 value 83.269982
iter 60 value 83.069262
final value 83.064945
converged
Fitting Repeat 5
# weights: 103
initial value 104.819663
iter 10 value 94.586065
iter 20 value 94.467514
iter 30 value 93.905600
iter 40 value 84.782626
iter 50 value 84.207935
iter 60 value 84.094624
iter 70 value 83.809924
iter 80 value 83.135507
iter 90 value 81.122192
iter 100 value 81.102978
final value 81.102978
stopped after 100 iterations
Fitting Repeat 1
# weights: 305
initial value 101.170009
iter 10 value 94.348533
iter 20 value 93.789790
iter 30 value 90.957348
iter 40 value 89.938895
iter 50 value 89.629324
iter 60 value 86.785410
iter 70 value 83.089291
iter 80 value 82.289111
iter 90 value 82.228444
iter 100 value 81.992402
final value 81.992402
stopped after 100 iterations
Fitting Repeat 2
# weights: 305
initial value 116.353118
iter 10 value 96.250931
iter 20 value 93.506162
iter 30 value 91.498686
iter 40 value 87.382969
iter 50 value 86.762121
iter 60 value 83.203924
iter 70 value 80.477108
iter 80 value 80.335748
iter 90 value 80.299884
iter 100 value 79.595896
final value 79.595896
stopped after 100 iterations
Fitting Repeat 3
# weights: 305
initial value 125.359294
iter 10 value 94.468080
iter 20 value 93.859206
iter 30 value 93.597753
iter 40 value 89.783049
iter 50 value 87.176731
iter 60 value 86.837867
iter 70 value 85.994667
iter 80 value 81.396858
iter 90 value 79.966846
iter 100 value 79.410287
final value 79.410287
stopped after 100 iterations
Fitting Repeat 4
# weights: 305
initial value 102.038195
iter 10 value 94.534178
iter 20 value 93.573352
iter 30 value 91.589100
iter 40 value 86.385276
iter 50 value 84.185743
iter 60 value 83.459598
iter 70 value 82.859091
iter 80 value 80.739458
iter 90 value 79.236016
iter 100 value 78.859947
final value 78.859947
stopped after 100 iterations
Fitting Repeat 5
# weights: 305
initial value 109.767671
iter 10 value 94.497177
iter 20 value 91.702499
iter 30 value 91.462920
iter 40 value 88.525599
iter 50 value 86.151147
iter 60 value 85.317974
iter 70 value 83.579379
iter 80 value 82.093192
iter 90 value 81.951108
iter 100 value 80.645151
final value 80.645151
stopped after 100 iterations
Fitting Repeat 1
# weights: 507
initial value 105.143689
iter 10 value 94.682145
iter 20 value 93.951306
iter 30 value 88.842151
iter 40 value 83.754398
iter 50 value 81.823263
iter 60 value 79.669068
iter 70 value 79.471090
iter 80 value 79.157665
iter 90 value 79.030579
iter 100 value 79.018325
final value 79.018325
stopped after 100 iterations
Fitting Repeat 2
# weights: 507
initial value 111.176459
iter 10 value 94.410306
iter 20 value 85.458744
iter 30 value 83.079886
iter 40 value 82.241274
iter 50 value 79.858844
iter 60 value 79.468805
iter 70 value 79.334565
iter 80 value 79.214411
iter 90 value 79.177894
iter 100 value 79.093594
final value 79.093594
stopped after 100 iterations
Fitting Repeat 3
# weights: 507
initial value 103.902924
iter 10 value 95.885140
iter 20 value 88.498031
iter 30 value 87.482756
iter 40 value 86.633801
iter 50 value 84.197835
iter 60 value 82.705067
iter 70 value 81.117708
iter 80 value 80.576867
iter 90 value 80.496703
iter 100 value 80.146692
final value 80.146692
stopped after 100 iterations
Fitting Repeat 4
# weights: 507
initial value 105.027728
iter 10 value 97.094731
iter 20 value 90.008981
iter 30 value 83.811768
iter 40 value 83.127183
iter 50 value 82.648418
iter 60 value 82.545905
iter 70 value 82.403039
iter 80 value 81.533734
iter 90 value 79.999792
iter 100 value 79.725878
final value 79.725878
stopped after 100 iterations
Fitting Repeat 5
# weights: 507
initial value 107.935462
iter 10 value 95.078355
iter 20 value 91.400292
iter 30 value 84.404195
iter 40 value 81.801246
iter 50 value 80.115314
iter 60 value 79.338657
iter 70 value 79.093624
iter 80 value 79.018128
iter 90 value 78.862933
iter 100 value 78.307455
final value 78.307455
stopped after 100 iterations
Fitting Repeat 1
# weights: 103
initial value 114.277484
iter 10 value 93.397703
iter 20 value 93.396900
iter 30 value 93.155173
iter 40 value 93.154638
iter 50 value 91.210297
iter 60 value 87.095745
iter 70 value 85.883369
iter 80 value 85.766887
final value 85.766858
converged
Fitting Repeat 2
# weights: 103
initial value 98.503408
final value 94.485849
converged
Fitting Repeat 3
# weights: 103
initial value 99.915075
iter 10 value 94.059793
iter 20 value 93.397959
iter 30 value 93.396860
iter 40 value 93.396304
final value 93.395942
converged
Fitting Repeat 4
# weights: 103
initial value 95.075055
final value 94.485704
converged
Fitting Repeat 5
# weights: 103
initial value 98.027275
final value 94.485845
converged
Fitting Repeat 1
# weights: 305
initial value 105.249570
iter 10 value 94.485445
iter 20 value 93.999710
iter 30 value 86.676128
iter 40 value 86.515244
iter 50 value 86.503765
iter 60 value 85.068089
iter 70 value 84.191379
iter 80 value 84.119016
iter 90 value 84.117373
iter 100 value 84.116151
final value 84.116151
stopped after 100 iterations
Fitting Repeat 2
# weights: 305
initial value 125.054877
iter 10 value 93.114869
iter 20 value 86.405765
iter 30 value 82.439749
iter 40 value 82.118988
iter 50 value 82.086532
final value 82.086505
converged
Fitting Repeat 3
# weights: 305
initial value 115.385413
iter 10 value 93.403131
iter 20 value 93.399645
iter 30 value 91.744023
iter 40 value 85.137599
iter 50 value 84.982424
iter 60 value 84.980009
final value 84.979772
converged
Fitting Repeat 4
# weights: 305
initial value 100.572880
iter 10 value 94.488478
iter 20 value 90.644669
iter 30 value 88.934337
iter 40 value 88.927261
iter 50 value 88.925849
iter 60 value 88.923781
iter 70 value 88.923395
iter 70 value 88.923395
iter 70 value 88.923395
final value 88.923395
converged
Fitting Repeat 5
# weights: 305
initial value 115.919052
iter 10 value 93.400540
iter 20 value 93.399601
iter 30 value 93.337000
final value 93.336579
converged
Fitting Repeat 1
# weights: 507
initial value 97.671325
iter 10 value 94.492461
iter 20 value 94.484263
iter 30 value 84.858214
iter 40 value 84.632500
final value 84.632253
converged
Fitting Repeat 2
# weights: 507
initial value 120.266626
iter 10 value 93.404104
iter 20 value 93.402911
iter 30 value 93.343628
iter 40 value 87.149470
iter 50 value 81.623729
iter 60 value 81.208079
iter 70 value 80.994949
iter 80 value 79.876289
iter 90 value 79.679562
iter 100 value 79.672560
final value 79.672560
stopped after 100 iterations
Fitting Repeat 3
# weights: 507
initial value 105.990870
iter 10 value 93.404565
iter 20 value 93.403828
iter 30 value 93.402812
iter 40 value 93.345093
iter 50 value 93.337520
iter 60 value 93.335483
iter 70 value 83.163651
iter 80 value 83.002249
iter 90 value 82.979136
final value 82.978935
converged
Fitting Repeat 4
# weights: 507
initial value 114.905272
iter 10 value 93.722816
iter 20 value 93.715251
iter 30 value 90.536318
iter 40 value 82.749038
iter 50 value 82.608316
iter 60 value 82.586360
final value 82.584841
converged
Fitting Repeat 5
# weights: 507
initial value 126.494865
iter 10 value 93.118299
iter 20 value 93.113984
iter 30 value 87.418515
iter 40 value 83.710597
iter 50 value 81.670529
iter 60 value 81.646940
iter 70 value 81.646550
iter 80 value 81.588780
iter 90 value 81.217137
iter 100 value 78.353649
final value 78.353649
stopped after 100 iterations
Fitting Repeat 1
# weights: 103
initial value 99.965577
final value 94.052910
converged
Fitting Repeat 2
# weights: 103
initial value 104.988996
iter 10 value 93.912797
iter 20 value 93.891999
final value 93.890821
converged
Fitting Repeat 3
# weights: 103
initial value 96.672131
final value 94.052910
converged
Fitting Repeat 4
# weights: 103
initial value 102.531959
final value 94.052910
converged
Fitting Repeat 5
# weights: 103
initial value 96.135264
final value 94.052910
converged
Fitting Repeat 1
# weights: 305
initial value 99.082049
final value 94.052910
converged
Fitting Repeat 2
# weights: 305
initial value 97.109871
iter 10 value 93.565062
final value 93.564928
converged
Fitting Repeat 3
# weights: 305
initial value 96.876965
final value 94.052910
converged
Fitting Repeat 4
# weights: 305
initial value 100.806914
final value 94.052910
converged
Fitting Repeat 5
# weights: 305
initial value 102.425028
final value 94.052910
converged
Fitting Repeat 1
# weights: 507
initial value 95.329683
final value 94.052910
converged
Fitting Repeat 2
# weights: 507
initial value 97.260564
iter 10 value 85.896249
iter 20 value 85.871904
final value 85.871899
converged
Fitting Repeat 3
# weights: 507
initial value 128.097480
final value 94.052910
converged
Fitting Repeat 4
# weights: 507
initial value 113.325178
final value 94.052910
converged
Fitting Repeat 5
# weights: 507
initial value 99.193800
iter 10 value 93.728449
iter 20 value 93.551606
final value 93.551243
converged
Fitting Repeat 1
# weights: 103
initial value 103.937153
iter 10 value 93.643730
iter 20 value 86.701175
iter 30 value 84.873034
iter 40 value 84.673689
iter 50 value 84.388931
iter 60 value 83.892631
final value 83.883376
converged
Fitting Repeat 2
# weights: 103
initial value 98.132699
iter 10 value 94.056890
iter 20 value 94.056597
iter 30 value 87.879965
iter 40 value 86.012268
iter 50 value 85.773861
iter 60 value 84.087334
iter 70 value 83.927590
iter 80 value 82.844588
iter 90 value 81.979294
iter 100 value 81.701729
final value 81.701729
stopped after 100 iterations
Fitting Repeat 3
# weights: 103
initial value 103.254919
iter 10 value 94.055681
iter 20 value 92.843494
iter 30 value 88.047521
iter 40 value 86.899804
iter 50 value 86.581064
iter 60 value 85.633637
iter 70 value 84.520368
iter 80 value 84.301460
iter 90 value 83.832534
iter 100 value 83.503319
final value 83.503319
stopped after 100 iterations
Fitting Repeat 4
# weights: 103
initial value 101.693178
iter 10 value 94.186725
iter 20 value 93.432704
iter 30 value 88.161797
iter 40 value 87.226199
iter 50 value 84.936522
iter 60 value 84.594609
iter 70 value 84.251908
iter 80 value 83.887066
final value 83.883376
converged
Fitting Repeat 5
# weights: 103
initial value 101.671286
iter 10 value 94.089455
iter 20 value 94.050336
iter 30 value 93.880243
iter 40 value 93.831744
iter 50 value 93.815229
iter 60 value 93.813877
iter 70 value 90.333137
iter 80 value 84.716861
iter 90 value 83.817586
iter 100 value 83.437690
final value 83.437690
stopped after 100 iterations
Fitting Repeat 1
# weights: 305
initial value 110.772036
iter 10 value 93.849677
iter 20 value 85.123494
iter 30 value 82.403015
iter 40 value 81.665379
iter 50 value 81.519236
iter 60 value 81.235222
iter 70 value 81.200813
iter 80 value 81.149758
iter 90 value 81.080818
iter 100 value 80.972121
final value 80.972121
stopped after 100 iterations
Fitting Repeat 2
# weights: 305
initial value 113.143471
iter 10 value 93.230671
iter 20 value 86.874995
iter 30 value 86.790606
iter 40 value 85.610353
iter 50 value 83.640344
iter 60 value 83.147969
iter 70 value 82.948671
iter 80 value 82.851624
iter 90 value 81.970237
iter 100 value 81.239319
final value 81.239319
stopped after 100 iterations
Fitting Repeat 3
# weights: 305
initial value 109.207137
iter 10 value 93.991532
iter 20 value 88.185961
iter 30 value 85.979910
iter 40 value 85.537748
iter 50 value 84.363198
iter 60 value 83.702961
iter 70 value 83.570764
iter 80 value 83.551793
iter 90 value 83.289411
iter 100 value 83.133722
final value 83.133722
stopped after 100 iterations
Fitting Repeat 4
# weights: 305
initial value 109.313127
iter 10 value 94.059340
iter 20 value 88.701103
iter 30 value 85.088348
iter 40 value 84.134737
iter 50 value 83.074782
iter 60 value 82.230643
iter 70 value 81.881873
iter 80 value 81.851936
iter 90 value 81.738062
iter 100 value 81.348361
final value 81.348361
stopped after 100 iterations
Fitting Repeat 5
# weights: 305
initial value 115.106621
iter 10 value 94.030683
iter 20 value 93.546591
iter 30 value 89.186181
iter 40 value 83.287899
iter 50 value 82.255214
iter 60 value 81.943362
iter 70 value 81.416925
iter 80 value 81.297898
iter 90 value 80.975158
iter 100 value 80.782938
final value 80.782938
stopped after 100 iterations
Fitting Repeat 1
# weights: 507
initial value 107.406149
iter 10 value 93.838332
iter 20 value 91.802517
iter 30 value 88.255337
iter 40 value 84.627033
iter 50 value 83.380827
iter 60 value 83.135291
iter 70 value 83.009586
iter 80 value 82.413691
iter 90 value 81.763258
iter 100 value 80.840408
final value 80.840408
stopped after 100 iterations
Fitting Repeat 2
# weights: 507
initial value 104.301656
iter 10 value 94.310125
iter 20 value 93.949723
iter 30 value 86.927383
iter 40 value 86.745458
iter 50 value 86.664208
iter 60 value 86.264493
iter 70 value 84.323385
iter 80 value 83.056321
iter 90 value 81.204213
iter 100 value 80.354358
final value 80.354358
stopped after 100 iterations
Fitting Repeat 3
# weights: 507
initial value 103.611979
iter 10 value 94.233149
iter 20 value 94.053799
iter 30 value 88.385771
iter 40 value 85.398977
iter 50 value 83.673147
iter 60 value 83.124060
iter 70 value 82.768817
iter 80 value 82.396459
iter 90 value 81.439288
iter 100 value 80.903409
final value 80.903409
stopped after 100 iterations
Fitting Repeat 4
# weights: 507
initial value 107.784188
iter 10 value 95.230628
iter 20 value 94.143990
iter 30 value 93.954014
iter 40 value 93.276621
iter 50 value 90.404751
iter 60 value 84.879188
iter 70 value 83.894603
iter 80 value 82.194882
iter 90 value 81.889012
iter 100 value 81.074113
final value 81.074113
stopped after 100 iterations
Fitting Repeat 5
# weights: 507
initial value 119.399374
iter 10 value 93.367484
iter 20 value 86.877749
iter 30 value 86.247621
iter 40 value 84.637780
iter 50 value 84.348180
iter 60 value 84.283643
iter 70 value 83.797641
iter 80 value 83.663928
iter 90 value 83.591588
iter 100 value 83.551793
final value 83.551793
stopped after 100 iterations
Fitting Repeat 1
# weights: 103
initial value 94.728706
final value 94.054507
converged
Fitting Repeat 2
# weights: 103
initial value 95.379898
final value 94.054375
converged
Fitting Repeat 3
# weights: 103
initial value 95.446362
final value 94.055299
converged
Fitting Repeat 4
# weights: 103
initial value 100.260205
iter 10 value 94.040353
iter 20 value 94.039342
iter 30 value 94.038838
iter 40 value 94.038409
final value 94.038397
converged
Fitting Repeat 5
# weights: 103
initial value 113.012813
iter 10 value 93.774237
iter 20 value 93.767436
iter 30 value 93.607117
iter 40 value 93.600613
iter 50 value 93.600185
iter 60 value 93.599788
iter 70 value 90.552657
iter 80 value 87.682495
iter 90 value 87.622705
iter 100 value 87.408521
final value 87.408521
stopped after 100 iterations
Fitting Repeat 1
# weights: 305
initial value 97.680549
iter 10 value 94.057500
iter 20 value 94.022829
iter 30 value 93.760432
iter 40 value 90.169943
iter 50 value 85.402202
iter 60 value 85.377919
iter 70 value 84.973469
iter 80 value 84.819721
iter 90 value 84.662516
iter 100 value 84.233971
final value 84.233971
stopped after 100 iterations
Fitting Repeat 2
# weights: 305
initial value 117.682012
iter 10 value 94.045152
iter 20 value 94.028984
iter 30 value 92.978008
iter 40 value 92.976747
iter 50 value 92.976080
iter 60 value 91.881234
iter 70 value 91.850731
iter 80 value 91.709557
final value 91.684091
converged
Fitting Repeat 3
# weights: 305
initial value 98.122435
iter 10 value 94.042644
iter 20 value 93.977020
iter 30 value 92.472809
iter 40 value 92.392442
iter 50 value 92.390806
iter 60 value 92.390602
iter 70 value 86.902506
iter 80 value 85.686266
iter 90 value 84.987117
iter 100 value 84.676258
final value 84.676258
stopped after 100 iterations
Fitting Repeat 4
# weights: 305
initial value 94.674260
iter 10 value 89.343511
iter 20 value 86.756824
iter 30 value 85.843155
iter 40 value 85.493554
iter 50 value 85.492385
iter 60 value 85.366869
iter 70 value 85.353311
iter 80 value 85.349785
iter 90 value 85.258304
iter 100 value 84.075707
final value 84.075707
stopped after 100 iterations
Fitting Repeat 5
# weights: 305
initial value 108.006056
iter 10 value 85.633147
iter 20 value 85.610616
iter 30 value 85.606958
iter 40 value 84.890321
iter 50 value 83.030674
iter 60 value 82.929749
iter 70 value 82.929643
iter 80 value 82.929518
final value 82.929510
converged
Fitting Repeat 1
# weights: 507
initial value 99.197356
iter 10 value 93.747865
iter 20 value 92.968177
iter 30 value 92.248741
iter 40 value 92.220836
iter 50 value 92.217977
iter 60 value 91.937650
iter 70 value 91.884080
iter 80 value 91.879140
final value 91.878667
converged
Fitting Repeat 2
# weights: 507
initial value 95.728680
iter 10 value 88.964885
iter 20 value 86.890608
iter 30 value 86.847943
iter 40 value 86.739465
iter 50 value 85.105608
iter 60 value 85.066477
iter 70 value 85.063677
iter 80 value 85.059577
iter 90 value 85.012462
final value 85.010775
converged
Fitting Repeat 3
# weights: 507
initial value 96.575552
iter 10 value 93.622873
iter 20 value 93.614756
iter 30 value 88.648172
iter 40 value 82.827383
iter 50 value 82.240117
iter 60 value 81.690020
iter 70 value 80.175261
iter 80 value 78.989059
iter 90 value 78.653414
iter 100 value 78.633382
final value 78.633382
stopped after 100 iterations
Fitting Repeat 4
# weights: 507
initial value 99.017329
iter 10 value 94.043191
iter 20 value 94.036203
iter 30 value 93.980118
iter 40 value 93.965895
iter 50 value 86.625478
iter 60 value 84.853351
iter 70 value 84.830036
iter 80 value 84.792797
iter 90 value 83.982534
iter 100 value 83.196928
final value 83.196928
stopped after 100 iterations
Fitting Repeat 5
# weights: 507
initial value 97.707982
iter 10 value 94.046031
iter 20 value 93.388220
iter 30 value 85.837268
final value 85.837264
converged
Fitting Repeat 1
# weights: 103
initial value 100.030428
final value 94.484211
converged
Fitting Repeat 2
# weights: 103
initial value 97.019574
final value 94.484211
converged
Fitting Repeat 3
# weights: 103
initial value 97.637446
final value 94.484211
converged
Fitting Repeat 4
# weights: 103
initial value 102.247802
final value 94.484211
converged
Fitting Repeat 5
# weights: 103
initial value 97.403245
final value 94.484211
converged
Fitting Repeat 1
# weights: 305
initial value 98.088164
final value 94.363637
converged
Fitting Repeat 2
# weights: 305
initial value 107.937961
final value 94.484211
converged
Fitting Repeat 3
# weights: 305
initial value 102.436038
final value 94.484210
converged
Fitting Repeat 4
# weights: 305
initial value 118.130533
final value 94.484211
converged
Fitting Repeat 5
# weights: 305
initial value 112.739582
final value 94.484211
converged
Fitting Repeat 1
# weights: 507
initial value 104.146526
final value 94.484211
converged
Fitting Repeat 2
# weights: 507
initial value 94.210938
iter 10 value 90.757410
iter 20 value 90.547879
iter 30 value 90.512188
iter 40 value 90.399677
final value 90.399672
converged
Fitting Repeat 3
# weights: 507
initial value 103.606716
final value 94.354396
converged
Fitting Repeat 4
# weights: 507
initial value 102.865643
final value 94.484211
converged
Fitting Repeat 5
# weights: 507
initial value 100.739528
final value 94.354396
converged
Fitting Repeat 1
# weights: 103
initial value 101.082860
iter 10 value 94.412354
iter 20 value 91.614909
iter 30 value 90.872700
iter 40 value 89.968557
iter 50 value 89.915460
final value 89.915411
converged
Fitting Repeat 2
# weights: 103
initial value 99.276861
iter 10 value 94.486468
iter 20 value 93.791578
iter 30 value 86.011731
iter 40 value 85.856876
iter 50 value 85.726359
iter 60 value 84.916964
iter 70 value 84.298994
iter 80 value 84.242528
final value 84.240249
converged
Fitting Repeat 3
# weights: 103
initial value 96.803404
iter 10 value 94.490054
iter 20 value 94.448133
iter 30 value 94.296925
iter 40 value 88.026067
iter 50 value 84.863692
iter 60 value 84.460065
iter 70 value 84.172225
iter 80 value 84.092513
iter 90 value 84.091598
final value 84.091357
converged
Fitting Repeat 4
# weights: 103
initial value 99.121525
iter 10 value 94.491852
iter 20 value 94.429107
iter 30 value 88.691561
iter 40 value 83.752113
iter 50 value 83.638239
iter 60 value 83.587376
iter 70 value 83.582655
iter 80 value 83.579900
final value 83.579899
converged
Fitting Repeat 5
# weights: 103
initial value 105.974952
iter 10 value 94.290243
iter 20 value 91.831989
iter 30 value 90.760439
iter 40 value 90.474047
iter 50 value 90.175486
iter 60 value 84.789209
iter 70 value 83.435646
iter 80 value 83.140630
iter 90 value 81.698578
iter 100 value 80.968819
final value 80.968819
stopped after 100 iterations
Fitting Repeat 1
# weights: 305
initial value 111.748832
iter 10 value 94.566035
iter 20 value 87.260297
iter 30 value 85.726962
iter 40 value 84.877371
iter 50 value 84.232561
iter 60 value 83.223826
iter 70 value 81.563013
iter 80 value 80.778506
iter 90 value 80.425045
iter 100 value 80.230953
final value 80.230953
stopped after 100 iterations
Fitting Repeat 2
# weights: 305
initial value 116.687043
iter 10 value 93.749307
iter 20 value 85.489682
iter 30 value 84.741621
iter 40 value 82.687699
iter 50 value 81.699290
iter 60 value 81.379437
iter 70 value 81.341275
iter 80 value 81.250373
iter 90 value 81.229132
iter 100 value 81.172086
final value 81.172086
stopped after 100 iterations
Fitting Repeat 3
# weights: 305
initial value 102.704194
iter 10 value 94.148675
iter 20 value 90.199032
iter 30 value 86.356030
iter 40 value 84.528903
iter 50 value 83.738261
iter 60 value 82.753511
iter 70 value 81.461255
iter 80 value 80.528718
iter 90 value 80.452783
iter 100 value 79.917740
final value 79.917740
stopped after 100 iterations
Fitting Repeat 4
# weights: 305
initial value 122.319093
iter 10 value 94.406886
iter 20 value 92.262600
iter 30 value 88.249390
iter 40 value 82.195198
iter 50 value 81.564270
iter 60 value 81.244284
iter 70 value 81.058381
iter 80 value 80.933996
iter 90 value 80.681539
iter 100 value 80.357128
final value 80.357128
stopped after 100 iterations
Fitting Repeat 5
# weights: 305
initial value 121.242297
iter 10 value 94.465069
iter 20 value 89.294650
iter 30 value 88.693426
iter 40 value 87.978206
iter 50 value 85.110655
iter 60 value 81.853455
iter 70 value 81.318425
iter 80 value 81.027051
iter 90 value 80.063023
iter 100 value 79.899549
final value 79.899549
stopped after 100 iterations
Fitting Repeat 1
# weights: 507
initial value 123.064748
iter 10 value 98.779727
iter 20 value 95.240457
iter 30 value 87.023649
iter 40 value 82.289574
iter 50 value 81.461388
iter 60 value 80.559688
iter 70 value 79.816880
iter 80 value 79.455881
iter 90 value 79.333875
iter 100 value 79.287712
final value 79.287712
stopped after 100 iterations
Fitting Repeat 2
# weights: 507
initial value 104.305405
iter 10 value 94.761423
iter 20 value 85.988022
iter 30 value 83.609720
iter 40 value 81.788081
iter 50 value 81.042664
iter 60 value 80.351509
iter 70 value 79.957154
iter 80 value 79.873713
iter 90 value 79.798228
iter 100 value 79.553756
final value 79.553756
stopped after 100 iterations
Fitting Repeat 3
# weights: 507
initial value 131.080368
iter 10 value 94.455312
iter 20 value 87.719457
iter 30 value 84.472730
iter 40 value 84.135934
iter 50 value 83.050489
iter 60 value 79.952362
iter 70 value 79.227123
iter 80 value 79.006972
iter 90 value 78.852271
iter 100 value 78.816471
final value 78.816471
stopped after 100 iterations
Fitting Repeat 4
# weights: 507
initial value 125.027680
iter 10 value 94.470578
iter 20 value 90.232800
iter 30 value 86.281496
iter 40 value 84.640542
iter 50 value 83.706152
iter 60 value 83.126749
iter 70 value 82.294521
iter 80 value 81.899924
iter 90 value 80.370069
iter 100 value 79.894965
final value 79.894965
stopped after 100 iterations
Fitting Repeat 5
# weights: 507
initial value 122.833667
iter 10 value 94.609851
iter 20 value 93.031958
iter 30 value 92.245969
iter 40 value 91.840114
iter 50 value 90.158759
iter 60 value 83.588454
iter 70 value 81.482483
iter 80 value 80.428169
iter 90 value 79.922587
iter 100 value 79.418257
final value 79.418257
stopped after 100 iterations
Fitting Repeat 1
# weights: 103
initial value 97.577307
final value 94.464059
converged
Fitting Repeat 2
# weights: 103
initial value 102.920317
final value 94.485731
converged
Fitting Repeat 3
# weights: 103
initial value 107.598613
final value 94.485482
converged
Fitting Repeat 4
# weights: 103
initial value 100.668310
final value 94.485741
converged
Fitting Repeat 5
# weights: 103
initial value 97.135438
iter 10 value 94.485932
iter 20 value 93.071663
iter 30 value 86.507192
iter 40 value 86.502258
final value 86.501561
converged
Fitting Repeat 1
# weights: 305
initial value 102.956496
iter 10 value 94.489024
iter 20 value 94.428860
iter 30 value 85.870830
iter 40 value 85.704108
iter 50 value 85.701786
iter 60 value 85.642975
iter 70 value 84.151392
iter 80 value 84.132017
iter 90 value 84.131789
final value 84.131772
converged
Fitting Repeat 2
# weights: 305
initial value 97.956985
iter 10 value 94.359545
iter 20 value 94.339558
iter 30 value 88.723929
iter 40 value 88.363181
iter 50 value 86.968170
iter 60 value 86.967401
final value 86.927928
converged
Fitting Repeat 3
# weights: 305
initial value 111.366107
iter 10 value 94.489644
iter 20 value 94.484425
iter 30 value 94.446082
iter 40 value 86.073527
iter 50 value 82.221620
iter 60 value 79.365592
iter 70 value 78.652381
iter 80 value 78.207203
iter 90 value 78.065197
iter 100 value 78.063992
final value 78.063992
stopped after 100 iterations
Fitting Repeat 4
# weights: 305
initial value 96.917400
iter 10 value 94.436446
iter 20 value 94.359838
iter 30 value 94.356207
iter 40 value 94.330532
iter 50 value 94.321696
final value 94.321644
converged
Fitting Repeat 5
# weights: 305
initial value 103.077378
iter 10 value 94.359202
iter 20 value 94.355856
final value 94.355621
converged
Fitting Repeat 1
# weights: 507
initial value 101.648845
iter 10 value 89.512521
iter 20 value 84.970901
iter 30 value 82.369576
iter 40 value 82.355160
final value 82.355055
converged
Fitting Repeat 2
# weights: 507
initial value 113.850182
iter 10 value 94.362645
iter 20 value 94.356928
iter 30 value 94.354454
iter 40 value 92.621476
final value 92.620972
converged
Fitting Repeat 3
# weights: 507
initial value 97.749623
iter 10 value 94.362133
iter 20 value 94.354696
iter 30 value 93.575275
iter 40 value 91.613947
final value 91.610032
converged
Fitting Repeat 4
# weights: 507
initial value 106.665328
iter 10 value 90.733970
iter 20 value 88.872962
iter 30 value 84.863174
iter 40 value 84.858378
iter 50 value 84.857265
iter 60 value 84.855624
iter 70 value 84.821703
iter 80 value 84.816611
iter 90 value 84.815819
iter 100 value 84.815231
final value 84.815231
stopped after 100 iterations
Fitting Repeat 5
# weights: 507
initial value 112.473076
iter 10 value 94.317745
iter 20 value 94.315881
iter 30 value 94.311887
iter 40 value 93.269033
iter 50 value 90.529330
iter 60 value 90.499405
iter 70 value 90.496976
iter 80 value 90.394741
iter 90 value 90.353278
iter 100 value 90.352355
final value 90.352355
stopped after 100 iterations
Fitting Repeat 1
# weights: 103
initial value 101.826305
final value 94.484211
converged
Fitting Repeat 2
# weights: 103
initial value 101.528815
final value 94.484211
converged
Fitting Repeat 3
# weights: 103
initial value 97.727662
final value 94.484211
converged
Fitting Repeat 4
# weights: 103
initial value 99.183675
iter 10 value 94.456805
iter 20 value 94.443263
final value 94.443243
converged
Fitting Repeat 5
# weights: 103
initial value 100.694136
final value 94.484211
converged
Fitting Repeat 1
# weights: 305
initial value 106.013763
final value 94.484211
converged
Fitting Repeat 2
# weights: 305
initial value 104.910465
iter 10 value 94.443244
iter 10 value 94.443244
iter 10 value 94.443244
final value 94.443244
converged
Fitting Repeat 3
# weights: 305
initial value 95.096423
final value 94.484211
converged
Fitting Repeat 4
# weights: 305
initial value 109.651549
final value 94.443243
converged
Fitting Repeat 5
# weights: 305
initial value 100.423736
final value 94.484211
converged
Fitting Repeat 1
# weights: 507
initial value 102.807361
final value 94.484211
converged
Fitting Repeat 2
# weights: 507
initial value 106.419400
final value 94.428839
converged
Fitting Repeat 3
# weights: 507
initial value 105.160120
iter 10 value 94.391937
iter 20 value 94.385586
final value 94.385584
converged
Fitting Repeat 4
# weights: 507
initial value 109.692356
iter 10 value 94.443245
final value 94.443243
converged
Fitting Repeat 5
# weights: 507
initial value 97.489251
iter 10 value 94.385554
iter 10 value 94.385554
iter 20 value 94.383696
final value 94.383622
converged
Fitting Repeat 1
# weights: 103
initial value 98.769108
iter 10 value 94.464604
iter 20 value 94.239866
iter 30 value 94.191188
iter 40 value 94.190261
iter 50 value 93.007411
iter 60 value 92.661863
iter 70 value 92.410492
iter 80 value 84.475486
iter 90 value 84.202573
iter 100 value 84.096735
final value 84.096735
stopped after 100 iterations
Fitting Repeat 2
# weights: 103
initial value 105.975100
iter 10 value 94.497114
iter 20 value 94.487602
iter 30 value 94.404194
iter 40 value 90.614913
iter 50 value 89.436404
iter 60 value 85.858787
iter 70 value 85.736069
iter 80 value 85.723298
iter 90 value 85.696639
iter 100 value 85.619523
final value 85.619523
stopped after 100 iterations
Fitting Repeat 3
# weights: 103
initial value 106.945509
iter 10 value 94.411724
iter 20 value 91.348416
iter 30 value 85.992281
iter 40 value 85.669485
iter 50 value 85.588666
iter 60 value 85.478786
iter 70 value 85.427891
final value 85.425811
converged
Fitting Repeat 4
# weights: 103
initial value 101.296184
iter 10 value 94.486438
iter 20 value 94.340453
iter 30 value 92.663824
iter 40 value 86.788117
iter 50 value 86.056258
iter 60 value 85.986200
iter 70 value 85.905716
iter 80 value 85.312624
iter 90 value 84.465480
iter 100 value 83.926998
final value 83.926998
stopped after 100 iterations
Fitting Repeat 5
# weights: 103
initial value 107.232532
iter 10 value 94.487750
iter 20 value 87.131797
iter 30 value 86.472490
iter 40 value 85.829905
iter 50 value 85.545064
iter 60 value 85.497085
iter 70 value 85.425825
final value 85.425811
converged
Fitting Repeat 1
# weights: 305
initial value 104.310694
iter 10 value 94.556227
iter 20 value 93.558947
iter 30 value 90.688231
iter 40 value 88.210002
iter 50 value 87.376903
iter 60 value 85.928786
iter 70 value 84.229437
iter 80 value 83.213844
iter 90 value 82.684834
iter 100 value 82.573222
final value 82.573222
stopped after 100 iterations
Fitting Repeat 2
# weights: 305
initial value 107.991892
iter 10 value 94.490026
iter 20 value 94.178670
iter 30 value 86.557193
iter 40 value 85.836633
iter 50 value 85.268422
iter 60 value 84.493156
iter 70 value 84.032935
iter 80 value 83.832136
iter 90 value 83.785419
iter 100 value 83.763640
final value 83.763640
stopped after 100 iterations
Fitting Repeat 3
# weights: 305
initial value 103.709939
iter 10 value 94.602678
iter 20 value 93.696491
iter 30 value 87.651473
iter 40 value 86.468545
iter 50 value 85.692366
iter 60 value 85.332868
iter 70 value 85.259660
iter 80 value 85.200543
iter 90 value 84.283653
iter 100 value 82.831559
final value 82.831559
stopped after 100 iterations
Fitting Repeat 4
# weights: 305
initial value 113.702197
iter 10 value 94.386568
iter 20 value 90.202894
iter 30 value 87.069728
iter 40 value 85.683326
iter 50 value 83.994405
iter 60 value 83.403351
iter 70 value 83.222364
iter 80 value 83.093253
iter 90 value 82.965019
iter 100 value 82.555758
final value 82.555758
stopped after 100 iterations
Fitting Repeat 5
# weights: 305
initial value 113.563029
iter 10 value 94.402339
iter 20 value 86.907243
iter 30 value 86.461040
iter 40 value 85.795861
iter 50 value 83.810772
iter 60 value 82.724908
iter 70 value 82.229986
iter 80 value 81.697787
iter 90 value 81.612942
iter 100 value 81.573362
final value 81.573362
stopped after 100 iterations
Fitting Repeat 1
# weights: 507
initial value 104.358872
iter 10 value 95.741487
iter 20 value 94.578422
iter 30 value 94.478114
iter 40 value 92.552199
iter 50 value 88.409037
iter 60 value 85.522237
iter 70 value 83.891716
iter 80 value 83.430822
iter 90 value 82.963969
iter 100 value 82.305036
final value 82.305036
stopped after 100 iterations
Fitting Repeat 2
# weights: 507
initial value 113.868364
iter 10 value 94.489408
iter 20 value 90.464844
iter 30 value 86.953023
iter 40 value 84.500302
iter 50 value 83.667759
iter 60 value 82.632977
iter 70 value 82.104786
iter 80 value 81.907002
iter 90 value 81.607965
iter 100 value 81.568701
final value 81.568701
stopped after 100 iterations
Fitting Repeat 3
# weights: 507
initial value 117.926668
iter 10 value 96.154247
iter 20 value 91.873568
iter 30 value 89.495422
iter 40 value 88.689674
iter 50 value 88.538919
iter 60 value 87.660733
iter 70 value 84.095377
iter 80 value 83.609857
iter 90 value 83.038034
iter 100 value 82.762013
final value 82.762013
stopped after 100 iterations
Fitting Repeat 4
# weights: 507
initial value 110.552838
iter 10 value 94.920247
iter 20 value 90.977837
iter 30 value 86.449913
iter 40 value 85.110089
iter 50 value 84.449431
iter 60 value 84.010253
iter 70 value 83.883687
iter 80 value 83.787989
iter 90 value 83.766966
iter 100 value 83.763912
final value 83.763912
stopped after 100 iterations
Fitting Repeat 5
# weights: 507
initial value 105.473382
iter 10 value 95.929581
iter 20 value 89.195571
iter 30 value 87.939712
iter 40 value 87.095398
iter 50 value 83.114557
iter 60 value 82.233826
iter 70 value 82.023837
iter 80 value 81.775686
iter 90 value 81.633420
iter 100 value 81.442596
final value 81.442596
stopped after 100 iterations
Fitting Repeat 1
# weights: 103
initial value 95.991424
final value 94.485795
converged
Fitting Repeat 2
# weights: 103
initial value 100.649327
final value 94.485836
converged
Fitting Repeat 3
# weights: 103
initial value 97.723035
iter 10 value 94.385047
final value 94.385042
converged
Fitting Repeat 4
# weights: 103
initial value 101.114316
iter 10 value 94.307747
iter 20 value 94.306109
iter 30 value 94.305649
iter 40 value 94.289283
iter 40 value 94.289283
iter 40 value 94.289283
final value 94.289283
converged
Fitting Repeat 5
# weights: 103
initial value 94.842672
final value 94.485793
converged
Fitting Repeat 1
# weights: 305
initial value 98.822425
iter 10 value 94.391278
iter 20 value 94.384136
iter 30 value 87.058017
iter 40 value 85.415463
iter 50 value 85.409537
iter 60 value 85.408853
iter 70 value 85.408041
final value 84.849799
converged
Fitting Repeat 2
# weights: 305
initial value 100.442760
iter 10 value 94.448326
iter 20 value 94.443856
iter 30 value 94.113279
iter 40 value 90.989785
iter 50 value 87.975988
iter 60 value 86.322515
iter 70 value 86.275940
iter 80 value 86.275679
final value 86.275122
converged
Fitting Repeat 3
# weights: 305
initial value 102.047178
iter 10 value 94.488133
iter 20 value 92.519255
iter 30 value 87.958332
iter 40 value 87.954622
iter 50 value 86.760530
iter 60 value 86.636002
iter 70 value 86.627730
iter 80 value 86.625406
iter 90 value 86.563597
iter 100 value 86.456198
final value 86.456198
stopped after 100 iterations
Fitting Repeat 4
# weights: 305
initial value 103.258935
iter 10 value 94.489059
iter 20 value 94.484222
iter 30 value 94.318683
iter 40 value 93.973737
iter 50 value 87.740537
iter 60 value 87.740189
final value 87.740181
converged
Fitting Repeat 5
# weights: 305
initial value 97.988939
iter 10 value 94.365667
iter 20 value 94.359336
iter 30 value 94.359121
iter 40 value 94.298288
iter 50 value 94.293051
iter 60 value 94.291516
iter 70 value 94.258857
iter 80 value 85.866993
iter 90 value 84.006664
iter 100 value 83.876085
final value 83.876085
stopped after 100 iterations
Fitting Repeat 1
# weights: 507
initial value 100.339740
iter 10 value 94.436519
iter 20 value 91.394666
iter 30 value 85.824202
iter 40 value 85.807115
iter 50 value 85.802660
iter 60 value 85.684245
iter 70 value 85.682874
iter 80 value 85.222333
iter 90 value 84.690659
final value 84.689262
converged
Fitting Repeat 2
# weights: 507
initial value 98.160751
iter 10 value 90.857977
iter 20 value 88.912837
iter 30 value 88.827593
iter 40 value 88.479728
iter 50 value 83.952104
iter 60 value 82.520524
iter 70 value 82.188836
iter 80 value 81.669140
iter 90 value 81.487381
iter 100 value 81.466446
final value 81.466446
stopped after 100 iterations
Fitting Repeat 3
# weights: 507
initial value 109.029564
iter 10 value 94.492768
iter 20 value 94.135918
iter 30 value 87.370685
iter 40 value 86.263558
iter 50 value 86.133388
iter 60 value 86.019591
final value 86.018262
converged
Fitting Repeat 4
# weights: 507
initial value 101.401716
iter 10 value 94.491921
iter 20 value 94.449247
iter 30 value 94.239759
final value 87.953063
converged
Fitting Repeat 5
# weights: 507
initial value 108.404175
iter 10 value 94.492485
iter 20 value 94.392650
iter 30 value 89.827239
final value 89.715970
converged
Fitting Repeat 1
# weights: 507
initial value 136.850985
iter 10 value 117.767302
iter 20 value 117.548907
iter 30 value 103.395038
iter 40 value 102.696356
iter 50 value 101.801974
iter 60 value 100.938896
iter 70 value 100.903023
iter 70 value 100.903022
iter 70 value 100.903022
final value 100.903022
converged
Fitting Repeat 2
# weights: 507
initial value 123.837319
iter 10 value 117.897843
iter 20 value 117.719601
iter 30 value 109.680160
iter 40 value 102.026248
iter 50 value 101.897156
iter 60 value 101.811841
iter 70 value 101.811386
iter 80 value 101.773595
iter 90 value 101.689282
iter 100 value 101.267575
final value 101.267575
stopped after 100 iterations
Fitting Repeat 3
# weights: 507
initial value 121.776503
iter 10 value 117.873950
iter 20 value 117.873307
iter 30 value 117.795995
final value 117.729113
converged
Fitting Repeat 4
# weights: 507
initial value 125.084697
iter 10 value 117.891319
iter 20 value 107.611212
iter 30 value 106.793293
iter 40 value 106.738362
iter 50 value 105.481377
iter 60 value 105.450050
iter 70 value 105.226263
iter 80 value 105.224260
iter 90 value 105.220011
final value 105.219842
converged
Fitting Repeat 5
# weights: 507
initial value 126.415788
iter 10 value 117.898271
iter 20 value 117.337878
iter 30 value 110.838337
iter 40 value 110.169194
iter 50 value 107.479332
final value 107.479329
converged
svmRadial
ranger
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
Setting levels: control = Positive, case = Negative
Setting direction: controls < cases
Setting levels: control = Positive, case = Negative
Setting direction: controls < cases
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
Setting levels: control = Positive, case = Negative
Setting direction: controls < cases
Setting levels: control = Positive, case = Negative
Setting direction: controls < cases
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
Setting levels: control = Positive, case = Negative
Setting direction: controls < cases
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
RUNIT TEST PROTOCOL -- Wed May 6 00:49:07 2026
***********************************************
Number of test functions: 7
Number of errors: 0
Number of failures: 0
1 Test Suite :
HPiP RUnit Tests - 7 test functions, 0 errors, 0 failures
Number of test functions: 7
Number of errors: 0
Number of failures: 0
Warning messages:
1: `repeats` has no meaning for this resampling method.
2: executing %dopar% sequentially: no parallel backend registered
>
>
>
>
> proc.time()
user system elapsed
40.019 1.082 81.322
HPiP.Rcheck/HPiP-Ex.timings
| name | user | system | elapsed | |
| FSmethod | 34.086 | 0.469 | 34.558 | |
| FreqInteractors | 0.458 | 0.029 | 0.487 | |
| calculateAAC | 0.035 | 0.000 | 0.035 | |
| calculateAutocor | 0.271 | 0.010 | 0.282 | |
| calculateCTDC | 0.070 | 0.003 | 0.073 | |
| calculateCTDD | 0.466 | 0.002 | 0.468 | |
| calculateCTDT | 0.130 | 0.000 | 0.131 | |
| calculateCTriad | 0.397 | 0.001 | 0.398 | |
| calculateDC | 0.082 | 0.002 | 0.083 | |
| calculateF | 0.295 | 0.000 | 0.295 | |
| calculateKSAAP | 0.091 | 0.002 | 0.094 | |
| calculateQD_Sm | 1.765 | 0.011 | 1.777 | |
| calculateTC | 1.483 | 0.025 | 1.509 | |
| calculateTC_Sm | 0.276 | 0.001 | 0.277 | |
| corr_plot | 34.085 | 0.384 | 34.511 | |
| enrichfindP | 0.547 | 0.038 | 15.197 | |
| enrichfind_hp | 0.046 | 0.000 | 0.996 | |
| enrichplot | 0.491 | 0.002 | 0.492 | |
| filter_missing_values | 0.001 | 0.000 | 0.001 | |
| getFASTA | 0.455 | 0.030 | 3.757 | |
| getHPI | 0.001 | 0.000 | 0.001 | |
| get_negativePPI | 0.002 | 0.000 | 0.002 | |
| get_positivePPI | 0 | 0 | 0 | |
| impute_missing_data | 0.000 | 0.001 | 0.001 | |
| plotPPI | 0.120 | 0.003 | 0.123 | |
| pred_ensembel | 12.870 | 0.084 | 11.632 | |
| var_imp | 36.228 | 0.454 | 36.883 | |