Britta Velten
| Snapshot Date: 2026-03-12 13:40 -0400 (Thu, 12 Mar 2026) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 95474d7 |
| git_last_commit_date: 2025-10-29 10:49:21 -0400 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-03-13 11:34 -0400 (Fri, 13 Mar 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2026-03-05 r89546) -- "Unsuffered Consequences" | 4819 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | R Under development (unstable) (2026-03-01 r89506) -- "Unsuffered Consequences" | 4049 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 928/2360 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.27.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | ERROR | |||||||||
| See other builds for graper in R Universe. | ||||||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.27.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.27.0.tar.gz |
| StartedAt: 2026-03-12 18:51:35 -0400 (Thu, 12 Mar 2026) |
| EndedAt: 2026-03-12 18:52:05 -0400 (Thu, 12 Mar 2026) |
| EllapsedTime: 30.3 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.27.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck’
* using R Under development (unstable) (2026-03-01 r89506)
* using platform: aarch64-apple-darwin23
* R was compiled by
Apple clang version 17.0.0 (clang-1700.3.19.1)
GNU Fortran (GCC) 14.2.0
* running under: macOS Sonoma 14.8.3
* using session charset: UTF-8
* current time: 2026-03-12 22:51:35 UTC
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.27.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.3.9.4)’
* used SDK: ‘MacOSX14.4.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.6/Resources/library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.27.0’ ** using staged installation ** libs using C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.3.9.4)’ using SDK: ‘MacOSX14.4.sdk’ clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c fit_graper.cpp -o fit_graper.o clang++ -arch arm64 -std=gnu++20 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R installing to /Library/Frameworks/R.framework/Versions/4.6/Resources/library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R Under development (unstable) (2026-03-01 r89506) -- "Unsuffered Consequences"
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: aarch64-apple-darwin23
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-847.811
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-566.269
ELB improved by 281.542
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-507.043
ELB improved by 59.2255
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.513
ELB improved by 35.5304
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.332
ELB improved by 15.1812
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.197
ELB improved by 7.13482
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.757
ELB improved by 5.43969
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.785
ELB improved by 4.97219
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.992
ELB improved by 4.79335
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.401
ELB improved by 4.59063
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.16
ELB improved by 4.24061
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.323
ELB improved by 3.83781
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.841
ELB improved by 3.48119
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.776
ELB improved by 3.06577
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.28
ELB improved by 2.49525
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.364
ELB improved by 1.91613
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.916
ELB improved by 1.44792
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.829
ELB improved by 1.08773
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.022
ELB improved by 0.806514
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.427
ELB improved by 0.595109
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.979
ELB improved by 0.448006
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.629
ELB improved by 0.350118
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.344
ELB improved by 0.285396
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.101
ELB improved by 0.242356
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.887
ELB improved by 0.213732
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.692
ELB improved by 0.195005
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.509
ELB improved by 0.18337
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.332
ELB improved by 0.177109
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.157
ELB improved by 0.175204
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.98
ELB improved by 0.177098
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.797
ELB improved by 0.182555
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.606
ELB improved by 0.191583
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.401
ELB improved by 0.204409
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.18
ELB improved by 0.221473
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.936
ELB improved by 0.243453
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.665
ELB improved by 0.271293
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.359
ELB improved by 0.306221
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.009
ELB improved by 0.34972
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.606
ELB improved by 0.403374
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.137
ELB improved by 0.468469
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.592
ELB improved by 0.545208
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.96
ELB improved by 0.631452
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.239
ELB improved by 0.721234
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.435
ELB improved by 0.803888
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.57
ELB improved by 0.865611
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.675
ELB improved by 0.895209
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.783
ELB improved by 0.89169
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.919
ELB improved by 0.86373
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.106
ELB improved by 0.812987
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.384
ELB improved by 0.721821
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.8
ELB improved by 0.583775
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.369
ELB improved by 0.431531
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.066
ELB improved by 0.302478
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.858
ELB improved by 0.208827
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.712
ELB improved by 0.145407
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.609
ELB improved by 0.103075
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.535
ELB improved by 0.0744013
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.48
ELB improved by 0.0545387
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.44
ELB improved by 0.0405549
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.409
ELB improved by 0.0306451
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.385
ELB improved by 0.0236141
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.367
ELB improved by 0.0186173
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.352
ELB improved by 0.0150444
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.339
ELB improved by 0.0124588
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.329
ELB improved by 0.0105546
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.32
ELB improved by 0.009122
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-829.696
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-562.424
ELB improved by 267.272
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-500.975
ELB improved by 61.449
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.659
ELB improved by 40.3158
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.688
ELB improved by 17.9712
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.413
ELB improved by 7.2749
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.416
ELB improved by 3.99649
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.206
ELB improved by 3.21041
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.164
ELB improved by 3.0422
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.089
ELB improved by 3.07487
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.865
ELB improved by 3.22365
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.396
ELB improved by 3.46931
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.611
ELB improved by 3.78524
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.534
ELB improved by 4.07707
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.401
ELB improved by 4.13302
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.676
ELB improved by 3.72414
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.776
ELB improved by 2.9
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.773
ELB improved by 2.0036
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.459
ELB improved by 1.31387
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.581
ELB improved by 0.878011
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.957
ELB improved by 0.623543
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.483
ELB improved by 0.474149
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.102
ELB improved by 0.381457
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.782
ELB improved by 0.319545
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.507
ELB improved by 0.275211
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.265
ELB improved by 0.241658
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.05
ELB improved by 0.215221
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.856
ELB improved by 0.193786
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.68
ELB improved by 0.176046
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.519
ELB improved by 0.161138
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.371
ELB improved by 0.148462
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.233
ELB improved by 0.137584
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.105
ELB improved by 0.128178
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.985
ELB improved by 0.119999
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.872
ELB improved by 0.112855
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.765
ELB improved by 0.106598
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.664
ELB improved by 0.101111
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.568
ELB improved by 0.0963018
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.476
ELB improved by 0.0920967
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.388
ELB improved by 0.088437
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.302
ELB improved by 0.0852757
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.22
ELB improved by 0.0825746
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.139
ELB improved by 0.0803031
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.061
ELB improved by 0.0784362
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.984
ELB improved by 0.0769535
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.908
ELB improved by 0.0758387
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.833
ELB improved by 0.0750783
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.758
ELB improved by 0.0746619
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.684
ELB improved by 0.0745816
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.609
ELB improved by 0.0748321
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.534
ELB improved by 0.075411
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.457
ELB improved by 0.0763194
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.38
ELB improved by 0.0775628
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.301
ELB improved by 0.0791529
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.219
ELB improved by 0.0811095
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.136
ELB improved by 0.0834637
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.05
ELB improved by 0.0862616
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.96
ELB improved by 0.089569
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.867
ELB improved by 0.0934767
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.769
ELB improved by 0.0981065
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.665
ELB improved by 0.103617
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.555
ELB improved by 0.110207
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.437
ELB improved by 0.118123
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.309
ELB improved by 0.127668
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.17
ELB improved by 0.139262
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.016
ELB improved by 0.153615
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.844
ELB improved by 0.172128
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.647
ELB improved by 0.197296
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.415
ELB improved by 0.231353
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.146
ELB improved by 0.268831
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.859
ELB improved by 0.287782
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.589
ELB improved by 0.269459
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.361
ELB improved by 0.228669
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.17
ELB improved by 0.190469
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.007
ELB improved by 0.163108
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.863
ELB improved by 0.144343
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.732
ELB improved by 0.13051
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.613
ELB improved by 0.118942
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.505
ELB improved by 0.10811
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.408
ELB improved by 0.097447
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.321
ELB improved by 0.0870042
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.244
ELB improved by 0.0770614
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.176
ELB improved by 0.067874
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.116
ELB improved by 0.0595832
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.064
ELB improved by 0.0522231
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.018
ELB improved by 0.0457579
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.978
ELB improved by 0.0401157
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.943
ELB improved by 0.0352112
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.912
ELB improved by 0.0309581
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.885
ELB improved by 0.0272757
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.86
ELB improved by 0.0240904
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.839
ELB improved by 0.0213373
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.82
ELB improved by 0.0189592
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.803
ELB improved by 0.0169063
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.788
ELB improved by 0.0151353
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.775
ELB improved by 0.0136091
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.762
ELB improved by 0.0122953
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.751
ELB improved by 0.0111664
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.741
ELB improved by 0.0101985
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.731
ELB improved by 0.00937078
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-827.778
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-588.285
ELB improved by 239.493
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-529.827
ELB improved by 58.4577
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-484.814
ELB improved by 45.0128
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.033
ELB improved by 21.7814
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.736
ELB improved by 8.29705
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.459
ELB improved by 4.2767
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.499
ELB improved by 2.96062
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.054
ELB improved by 2.4447
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.884
ELB improved by 2.17044
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.916
ELB improved by 1.96733
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.122
ELB improved by 1.79464
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.478
ELB improved by 1.64359
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.966
ELB improved by 1.51203
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.57
ELB improved by 1.39589
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.283
ELB improved by 1.28712
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.105
ELB improved by 1.17797
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.039
ELB improved by 1.06628
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.084
ELB improved by 0.954694
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.237
ELB improved by 0.846543
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.494
ELB improved by 0.743884
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.846
ELB improved by 0.647756
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.287
ELB improved by 0.55884
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.809
ELB improved by 0.477789
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.404
ELB improved by 0.405243
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.062
ELB improved by 0.341672
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.775
ELB improved by 0.287212
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.533
ELB improved by 0.241566
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.329
ELB improved by 0.204031
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.156
ELB improved by 0.173629
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.007
ELB improved by 0.14927
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.877
ELB improved by 0.129888
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.762
ELB improved by 0.114533
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.66
ELB improved by 0.102404
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.567
ELB improved by 0.0928573
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.481
ELB improved by 0.0853873
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.402
ELB improved by 0.0796077
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.327
ELB improved by 0.0752277
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.255
ELB improved by 0.072033
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.185
ELB improved by 0.06987
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.116
ELB improved by 0.0686348
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.048
ELB improved by 0.0682639
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.979
ELB improved by 0.0687288
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.909
ELB improved by 0.0700317
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.837
ELB improved by 0.0722028
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.762
ELB improved by 0.075299
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.682
ELB improved by 0.0794036
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.598
ELB improved by 0.0846259
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.506
ELB improved by 0.0911016
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.407
ELB improved by 0.0989917
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.299
ELB improved by 0.10848
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.179
ELB improved by 0.11977
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.046
ELB improved by 0.133075
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.898
ELB improved by 0.148604
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.731
ELB improved by 0.166548
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.544
ELB improved by 0.18705
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.334
ELB improved by 0.210177
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.098
ELB improved by 0.235885
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.834
ELB improved by 0.263986
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.54
ELB improved by 0.294116
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.214
ELB improved by 0.325711
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.856
ELB improved by 0.357978
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.466
ELB improved by 0.389885
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.046
ELB improved by 0.420147
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.599
ELB improved by 0.447284
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.129
ELB improved by 0.469812
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.642
ELB improved by 0.486716
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.144
ELB improved by 0.498267
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.637
ELB improved by 0.507027
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.119
ELB improved by 0.518094
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.583
ELB improved by 0.536051
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.028
ELB improved by 0.555214
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.476
ELB improved by 0.551973
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.968
ELB improved by 0.507651
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.531
ELB improved by 0.436894
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.166
ELB improved by 0.364762
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.863
ELB improved by 0.303089
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.609
ELB improved by 0.25411
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.393
ELB improved by 0.215805
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.209
ELB improved by 0.184237
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.053
ELB improved by 0.155817
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.924
ELB improved by 0.12946
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.817
ELB improved by 0.10649
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.729
ELB improved by 0.0883957
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.654
ELB improved by 0.0752715
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.588
ELB improved by 0.0660109
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.529
ELB improved by 0.059088
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.475
ELB improved by 0.0531003
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.428
ELB improved by 0.0470832
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.388
ELB improved by 0.0406891
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.353
ELB improved by 0.034141
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.326
ELB improved by 0.0279388
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.303
ELB improved by 0.0225189
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.285
ELB improved by 0.0180825
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.27
ELB improved by 0.0146112
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.258
ELB improved by 0.0119646
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.248
ELB improved by 0.00996766
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-891.522
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-580.441
ELB improved by 311.081
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-521.426
ELB improved by 59.0152
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-483.501
ELB improved by 37.9252
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.648
ELB improved by 16.8529
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.266
ELB improved by 7.38236
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.734
ELB improved by 4.53166
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.192
ELB improved by 3.54196
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.995
ELB improved by 3.19678
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.833
ELB improved by 3.16193
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.551
ELB improved by 3.28223
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.098
ELB improved by 3.45319
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.554
ELB improved by 3.54401
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.158
ELB improved by 3.39556
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.222
ELB improved by 2.93598
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.939
ELB improved by 2.28302
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.29
ELB improved by 1.64899
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.127
ELB improved by 1.16354
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.291
ELB improved by 0.835637
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.67
ELB improved by 0.621612
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.192
ELB improved by 0.477583
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.818
ELB improved by 0.374278
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.521
ELB improved by 0.296597
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.283
ELB improved by 0.238063
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.088
ELB improved by 0.194846
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.925
ELB improved by 0.163232
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.785
ELB improved by 0.139803
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.663
ELB improved by 0.121949
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.555
ELB improved by 0.1079
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.459
ELB improved by 0.0965217
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.372
ELB improved by 0.087089
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.293
ELB improved by 0.0791302
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.22
ELB improved by 0.0723271
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.154
ELB improved by 0.0664557
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.092
ELB improved by 0.061352
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.035
ELB improved by 0.0568915
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.983
ELB improved by 0.0529768
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.933
ELB improved by 0.0495305
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.886
ELB improved by 0.0464893
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.843
ELB improved by 0.0438015
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.801
ELB improved by 0.0414238
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.762
ELB improved by 0.0393202
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.724
ELB improved by 0.03746
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.689
ELB improved by 0.0358172
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.654
ELB improved by 0.0343694
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.621
ELB improved by 0.0330971
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.589
ELB improved by 0.0319834
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.558
ELB improved by 0.031013
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.528
ELB improved by 0.0301723
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.499
ELB improved by 0.0294487
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.47
ELB improved by 0.0288309
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.441
ELB improved by 0.0283083
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.414
ELB improved by 0.027871
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.386
ELB improved by 0.0275103
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.359
ELB improved by 0.027218
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.332
ELB improved by 0.0269873
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.305
ELB improved by 0.0268127
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.278
ELB improved by 0.0266897
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.252
ELB improved by 0.0266154
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.225
ELB improved by 0.0265883
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.199
ELB improved by 0.0266085
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.172
ELB improved by 0.0266775
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.145
ELB improved by 0.0267988
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.118
ELB improved by 0.0269774
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.091
ELB improved by 0.0272206
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.063
ELB improved by 0.0275381
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.035
ELB improved by 0.0279418
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.007
ELB improved by 0.0284462
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.978
ELB improved by 0.0290676
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.948
ELB improved by 0.0298228
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.917
ELB improved by 0.0307269
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.886
ELB improved by 0.0317898
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.853
ELB improved by 0.033012
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.818
ELB improved by 0.0343812
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.782
ELB improved by 0.0358719
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.745
ELB improved by 0.0374522
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.706
ELB improved by 0.0390971
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.665
ELB improved by 0.0408076
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.622
ELB improved by 0.042624
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.578
ELB improved by 0.0446251
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.531
ELB improved by 0.0469062
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.481
ELB improved by 0.0495388
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.429
ELB improved by 0.0525193
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.373
ELB improved by 0.0557125
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.314
ELB improved by 0.05881
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.253
ELB improved by 0.0613396
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.19
ELB improved by 0.0627755
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.127
ELB improved by 0.0627499
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.066
ELB improved by 0.061249
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.007
ELB improved by 0.0586183
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.952
ELB improved by 0.0553504
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.9
ELB improved by 0.0518489
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.852
ELB improved by 0.0483409
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.807
ELB improved by 0.0449211
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.765
ELB improved by 0.0416252
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.727
ELB improved by 0.0384729
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.691
ELB improved by 0.0354826
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.659
ELB improved by 0.0326716
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.629
ELB improved by 0.0300539
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.601
ELB improved by 0.0276382
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.576
ELB improved by 0.0254276
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.552
ELB improved by 0.0234199
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.531
ELB improved by 0.0216085
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.511
ELB improved by 0.0199834
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.492
ELB improved by 0.0185321
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.475
ELB improved by 0.0172409
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.459
ELB improved by 0.0160951
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.444
ELB improved by 0.0150801
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.429
ELB improved by 0.0141816
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.416
ELB improved by 0.0133862
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.403
ELB improved by 0.0126816
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.391
ELB improved by 0.0120564
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.38
ELB improved by 0.0115006
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.369
ELB improved by 0.0110054
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.358
ELB improved by 0.010563
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.348
ELB improved by 0.0101667
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.338
ELB improved by 0.00981066
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
1.094 0.090 1.202
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.012 | 0.005 | 0.017 | |
| getPIPs | 0.011 | 0.005 | 0.016 | |
| graper | 0.019 | 0.008 | 0.027 | |
| makeExampleData | 0.002 | 0.000 | 0.002 | |
| makeExampleDataWithUnequalGroups | 0.002 | 0.001 | 0.003 | |
| plotELBO | 0.110 | 0.006 | 0.117 | |
| plotGroupPenalties | 0.355 | 0.006 | 0.367 | |
| plotPosterior | 0.313 | 0.012 | 0.337 | |
| predict.graper | 0.212 | 0.024 | 0.247 | |
| print.graper | 0.011 | 0.004 | 0.020 | |