Britta Velten
| Snapshot Date: 2025-12-17 13:40 -0500 (Wed, 17 Dec 2025) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 95474d7 |
| git_last_commit_date: 2025-10-29 10:49:21 -0500 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2025-12-18 11:34 -0500 (Thu, 18 Dec 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2025-10-20 r88955) -- "Unsuffered Consequences" | 4875 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | R Under development (unstable) (2025-11-04 r88984) -- "Unsuffered Consequences" | 4593 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 915/2332 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.27.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.27.0 |
| Command: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings graper_1.27.0.tar.gz |
| StartedAt: 2025-12-17 23:48:06 -0500 (Wed, 17 Dec 2025) |
| EndedAt: 2025-12-17 23:49:37 -0500 (Wed, 17 Dec 2025) |
| EllapsedTime: 91.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings graper_1.27.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck’
* using R Under development (unstable) (2025-10-20 r88955)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.27.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/home/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.23-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.27.0’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’ g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.23-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.23-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.23-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.23-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.23-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.23-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R Under development (unstable) (2025-10-20 r88955) -- "Unsuffered Consequences"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-889.564
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-560.359
ELB improved by 329.205
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-511.303
ELB improved by 49.0558
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-482.346
ELB improved by 28.9567
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-469.242
ELB improved by 13.1046
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.474
ELB improved by 5.76824
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.204
ELB improved by 3.26949
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.651
ELB improved by 2.5532
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.3
ELB improved by 2.35092
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.967
ELB improved by 2.33292
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.559
ELB improved by 2.40805
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.055
ELB improved by 2.50406
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.543
ELB improved by 2.51149
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.227
ELB improved by 2.31619
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.319
ELB improved by 1.90823
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.9
ELB improved by 1.41872
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.902
ELB improved by 0.998695
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.194
ELB improved by 0.707716
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.666
ELB improved by 0.528314
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.241
ELB improved by 0.4241
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.875
ELB improved by 0.36665
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.537
ELB improved by 0.337493
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.212
ELB improved by 0.325067
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.89
ELB improved by 0.322314
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.565
ELB improved by 0.324972
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.235
ELB improved by 0.330414
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.898
ELB improved by 0.336985
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.554
ELB improved by 0.343657
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.204
ELB improved by 0.349886
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.848
ELB improved by 0.355532
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.488
ELB improved by 0.360785
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.122
ELB improved by 0.366074
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.75
ELB improved by 0.371918
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.371
ELB improved by 0.378739
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.984
ELB improved by 0.386605
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.589
ELB improved by 0.39496
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.187
ELB improved by 0.402441
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.78
ELB improved by 0.407056
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.373
ELB improved by 0.406844
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.972
ELB improved by 0.400623
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.584
ELB improved by 0.388177
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.214
ELB improved by 0.369866
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.868
ELB improved by 0.346277
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.55
ELB improved by 0.318188
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.263
ELB improved by 0.286624
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.01
ELB improved by 0.252882
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.792
ELB improved by 0.218495
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.607
ELB improved by 0.185097
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.453
ELB improved by 0.154178
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.326
ELB improved by 0.126812
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.222
ELB improved by 0.103527
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.138
ELB improved by 0.0843344
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.069
ELB improved by 0.068887
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.012
ELB improved by 0.0566507
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.965
ELB improved by 0.0470449
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.926
ELB improved by 0.0395277
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.892
ELB improved by 0.0336349
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.863
ELB improved by 0.0289896
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.838
ELB improved by 0.0252964
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.816
ELB improved by 0.0223284
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.796
ELB improved by 0.019914
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.778
ELB improved by 0.0179246
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.761
ELB improved by 0.0162636
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.747
ELB improved by 0.014859
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.733
ELB improved by 0.0136568
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.72
ELB improved by 0.0126161
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.709
ELB improved by 0.0117061
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.698
ELB improved by 0.0109032
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.688
ELB improved by 0.0101891
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.678
ELB improved by 0.00954963
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-873.616
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-581.379
ELB improved by 292.237
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-519.53
ELB improved by 61.8491
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-479.016
ELB improved by 40.5137
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.677
ELB improved by 20.3392
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.22
ELB improved by 9.45747
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.629
ELB improved by 5.59026
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.87
ELB improved by 4.75952
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.947
ELB improved by 4.92323
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.564
ELB improved by 5.38252
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.932
ELB improved by 5.63207
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.66
ELB improved by 5.27161
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.349
ELB improved by 4.31099
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.154
ELB improved by 3.19516
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.857
ELB improved by 2.29704
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.26
ELB improved by 1.59746
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.192
ELB improved by 1.06801
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.461
ELB improved by 0.731032
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.918
ELB improved by 0.543063
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.481
ELB improved by 0.43634
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.111
ELB improved by 0.370091
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.786
ELB improved by 0.325568
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.492
ELB improved by 0.293925
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.221
ELB improved by 0.27048
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.969
ELB improved by 0.252476
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.731
ELB improved by 0.238168
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.504
ELB improved by 0.226394
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.288
ELB improved by 0.216359
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.08
ELB improved by 0.207514
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.881
ELB improved by 0.199479
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.689
ELB improved by 0.192
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.504
ELB improved by 0.18491
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.326
ELB improved by 0.178111
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.154
ELB improved by 0.171552
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.989
ELB improved by 0.165218
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.83
ELB improved by 0.159118
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.677
ELB improved by 0.153278
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.529
ELB improved by 0.147733
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.386
ELB improved by 0.142527
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.249
ELB improved by 0.13771
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.115
ELB improved by 0.133334
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.986
ELB improved by 0.129459
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.86
ELB improved by 0.126152
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.736
ELB improved by 0.123486
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.615
ELB improved by 0.121543
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.494
ELB improved by 0.120411
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.374
ELB improved by 0.120171
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.253
ELB improved by 0.12088
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.131
ELB improved by 0.122534
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.006
ELB improved by 0.125019
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.878
ELB improved by 0.128063
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.746
ELB improved by 0.131217
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.612
ELB improved by 0.133895
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.477
ELB improved by 0.135507
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.341
ELB improved by 0.135616
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.207
ELB improved by 0.134072
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.076
ELB improved by 0.131041
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.949
ELB improved by 0.126953
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.827
ELB improved by 0.122415
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.709
ELB improved by 0.118147
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.594
ELB improved by 0.114957
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.48
ELB improved by 0.113684
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.365
ELB improved by 0.114969
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.247
ELB improved by 0.118506
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.125
ELB improved by 0.12167
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.006
ELB improved by 0.119073
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.899
ELB improved by 0.10641
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.813
ELB improved by 0.0861253
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.748
ELB improved by 0.0653073
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.699
ELB improved by 0.0485956
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.663
ELB improved by 0.0365693
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.635
ELB improved by 0.0281386
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.613
ELB improved by 0.0221712
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.595
ELB improved by 0.0178663
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.58
ELB improved by 0.0147012
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.568
ELB improved by 0.0123335
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.557
ELB improved by 0.0105339
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.548
ELB improved by 0.00914496
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-879.096
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-575.307
ELB improved by 303.789
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-518.863
ELB improved by 56.4437
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-484.215
ELB improved by 34.648
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-469.44
ELB improved by 14.7748
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.345
ELB improved by 7.0953
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.677
ELB improved by 4.66774
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.709
ELB improved by 3.9684
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.761
ELB improved by 3.94785
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.57
ELB improved by 4.19092
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.154
ELB improved by 4.41657
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.743
ELB improved by 4.41007
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.723
ELB improved by 4.02073
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.545
ELB improved by 3.17751
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.396
ELB improved by 2.14964
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.049
ELB improved by 1.34612
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.198
ELB improved by 0.85188
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.63
ELB improved by 0.568085
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.226
ELB improved by 0.403125
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.923
ELB improved by 0.303608
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.683
ELB improved by 0.240283
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.485
ELB improved by 0.197319
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.319
ELB improved by 0.166354
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.176
ELB improved by 0.142967
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.051
ELB improved by 0.12472
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.941
ELB improved by 0.110172
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.843
ELB improved by 0.0983999
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.754
ELB improved by 0.0887674
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.673
ELB improved by 0.0808133
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.599
ELB improved by 0.0741905
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.53
ELB improved by 0.0686325
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.466
ELB improved by 0.0639331
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.406
ELB improved by 0.0599313
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.35
ELB improved by 0.0565012
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.296
ELB improved by 0.0535436
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.245
ELB improved by 0.0509805
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.197
ELB improved by 0.0487497
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.15
ELB improved by 0.0468023
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.105
ELB improved by 0.0450999
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.061
ELB improved by 0.0436131
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.019
ELB improved by 0.0423206
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.977
ELB improved by 0.0412091
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.937
ELB improved by 0.0402738
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.898
ELB improved by 0.03952
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.859
ELB improved by 0.0389661
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.82
ELB improved by 0.0386488
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.781
ELB improved by 0.0386322
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.742
ELB improved by 0.0390227
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.702
ELB improved by 0.0399953
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.661
ELB improved by 0.0418354
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.616
ELB improved by 0.0450018
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.565
ELB improved by 0.0501996
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.507
ELB improved by 0.0583829
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.437
ELB improved by 0.0704231
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.351
ELB improved by 0.0859651
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.249
ELB improved by 0.101643
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.137
ELB improved by 0.111484
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.025
ELB improved by 0.112146
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.919
ELB improved by 0.106564
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.819
ELB improved by 0.0998467
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.724
ELB improved by 0.0947567
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.632
ELB improved by 0.0917551
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.542
ELB improved by 0.0904893
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.451
ELB improved by 0.0905886
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.359
ELB improved by 0.0918618
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.265
ELB improved by 0.094294
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.167
ELB improved by 0.0980181
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.064
ELB improved by 0.103309
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.953
ELB improved by 0.11061
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.833
ELB improved by 0.120606
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.698
ELB improved by 0.134354
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.545
ELB improved by 0.153516
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.364
ELB improved by 0.180723
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.144
ELB improved by 0.220137
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.866
ELB improved by 0.278214
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.501
ELB improved by 0.364968
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.004
ELB improved by 0.496993
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.303
ELB improved by 0.700733
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.31
ELB improved by 0.993224
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.956
ELB improved by 1.35336
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.105
ELB improved by 1.85155
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.643
ELB improved by 2.46174
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.039
ELB improved by 2.60396
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.635
ELB improved by 2.40382
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.572
ELB improved by 2.0636
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.034
ELB improved by 1.53781
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.977
ELB improved by 1.05712
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.293
ELB improved by 0.683352
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.87
ELB improved by 0.42367
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.604
ELB improved by 0.266176
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.428
ELB improved by 0.175352
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.306
ELB improved by 0.122466
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.215
ELB improved by 0.090361
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.146
ELB improved by 0.06973
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.09
ELB improved by 0.055666
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.044
ELB improved by 0.0455563
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.007
ELB improved by 0.0379659
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.974
ELB improved by 0.0320731
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.947
ELB improved by 0.0273835
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.923
ELB improved by 0.023584
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.903
ELB improved by 0.0204654
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.885
ELB improved by 0.0178815
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.869
ELB improved by 0.0157253
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.856
ELB improved by 0.0139159
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.843
ELB improved by 0.0123906
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.832
ELB improved by 0.0110999
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.822
ELB improved by 0.010004
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.813
ELB improved by 0.00907047
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-831.057
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-561.066
ELB improved by 269.992
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-501.754
ELB improved by 59.3117
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.454
ELB improved by 34.3
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.809
ELB improved by 13.6453
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.897
ELB improved by 5.91176
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.758
ELB improved by 4.13888
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.853
ELB improved by 3.90473
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.692
ELB improved by 4.16195
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.201
ELB improved by 4.49101
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.741
ELB improved by 4.45951
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.957
ELB improved by 3.78412
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.264
ELB improved by 2.69332
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.564
ELB improved by 1.69992
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.507
ELB improved by 1.05665
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.799
ELB improved by 0.707858
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.271
ELB improved by 0.528253
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.836
ELB improved by 0.434655
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.451
ELB improved by 0.384777
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.093
ELB improved by 0.358229
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.748
ELB improved by 0.344973
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.408
ELB improved by 0.339814
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.069
ELB improved by 0.339886
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.725
ELB improved by 0.343522
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.375
ELB improved by 0.349778
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.017
ELB improved by 0.358257
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.648
ELB improved by 0.369074
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.265
ELB improved by 0.382854
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.864
ELB improved by 0.400691
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.44
ELB improved by 0.424012
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.986
ELB improved by 0.45426
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.494
ELB improved by 0.492445
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.955
ELB improved by 0.538723
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.363
ELB improved by 0.592183
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.712
ELB improved by 0.650545
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.003
ELB improved by 0.709274
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.242
ELB improved by 0.760511
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.449
ELB improved by 0.793434
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.651
ELB improved by 0.797532
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.883
ELB improved by 0.768236
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.172
ELB improved by 0.711493
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.528
ELB improved by 0.643597
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.942
ELB improved by 0.586546
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.379
ELB improved by 0.562195
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.798
ELB improved by 0.58125
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.18
ELB improved by 0.618095
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.549
ELB improved by 0.631407
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.883
ELB improved by 0.665354
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.154
ELB improved by 0.729494
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.467
ELB improved by 0.686528
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.9
ELB improved by 0.567546
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.431
ELB improved by 0.468571
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.066
ELB improved by 0.365212
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.813
ELB improved by 0.253247
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.64
ELB improved by 0.172616
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.512
ELB improved by 0.127795
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.409
ELB improved by 0.103199
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.322
ELB improved by 0.0870122
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.249
ELB improved by 0.073347
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.188
ELB improved by 0.0605531
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.139
ELB improved by 0.0492409
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.099
ELB improved by 0.0402929
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.065
ELB improved by 0.0338913
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.035
ELB improved by 0.0296547
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.008
ELB improved by 0.0270887
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.982
ELB improved by 0.0258569
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.956
ELB improved by 0.0258648
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.929
ELB improved by 0.0272783
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.898
ELB improved by 0.0305331
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.862
ELB improved by 0.0362788
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.817
ELB improved by 0.0449837
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.762
ELB improved by 0.0556966
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.697
ELB improved by 0.0642345
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.633
ELB improved by 0.0643135
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.579
ELB improved by 0.0544564
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.538
ELB improved by 0.0409697
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.507
ELB improved by 0.0303046
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.483
ELB improved by 0.0240228
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.462
ELB improved by 0.0210405
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.442
ELB improved by 0.0201918
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.421
ELB improved by 0.0209035
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.398
ELB improved by 0.0231086
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.371
ELB improved by 0.0270821
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.338
ELB improved by 0.033264
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.296
ELB improved by 0.0418949
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.243
ELB improved by 0.0523169
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.181
ELB improved by 0.0624336
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.111
ELB improved by 0.0699225
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.035
ELB improved by 0.0756239
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.949
ELB improved by 0.0859942
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.836
ELB improved by 0.113537
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.662
ELB improved by 0.173891
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.416
ELB improved by 0.245806
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.198
ELB improved by 0.218086
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.093
ELB improved by 0.104743
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.051
ELB improved by 0.0426201
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.029
ELB improved by 0.0216027
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.016
ELB improved by 0.013165
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.007
ELB improved by 0.00919407
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.471 0.202 2.662
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.051 | 0.020 | 0.072 | |
| getPIPs | 0.050 | 0.009 | 0.059 | |
| graper | 0.082 | 0.016 | 0.098 | |
| makeExampleData | 0.009 | 0.001 | 0.010 | |
| makeExampleDataWithUnequalGroups | 0.011 | 0.002 | 0.013 | |
| plotELBO | 0.326 | 0.026 | 0.352 | |
| plotGroupPenalties | 1.074 | 0.050 | 1.124 | |
| plotPosterior | 0.619 | 0.023 | 0.642 | |
| predict.graper | 2.076 | 0.072 | 2.148 | |
| print.graper | 0.048 | 0.014 | 0.062 | |