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| Package 96/205 | OS | Arch | BUILD | CHECK | BUILD BIN |
KEGGSOAP1.7.0J. Zhang | Linux (SUSE 9.2) | x86_64 | OK | WARNINGS | |
| Linux (SUSE 9.2) | i686 | OK | WARNINGS | ||
| Solaris 2.9 | sparc | OK | OK | ||
| Linux (SUSE 10.0) | x86_64 | OK | WARNINGS | ||
| Windows Server 2003 | x86_64 | OK | ERROR | ERROR | |
| Windows XP | i686 | OK | ERROR | skipped | |
| Mac OS X (10.4.6) | i686 | OK | [ WARNINGS ] |
| Package: KEGGSOAP |
| Version: 1.7.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check KEGGSOAP_1.7.0.tar.gz |
| RetCode: 0 |
| Time: 82.3 seconds |
| Status: WARNINGS |
| CheckDir: KEGGSOAP.Rcheck |
| Warnings: 1 |
* checking for working latex ... OK
* using log directory '/Users/biocbuild/1.9d/Rpacks/KEGGSOAP.Rcheck'
* using R version 2.4.0 alpha (2006-09-07 r39185)
* checking for file 'KEGGSOAP/DESCRIPTION' ... OK
* this is package 'KEGGSOAP' version '1.7.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'KEGGSOAP' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for syntax errors ... OK
* checking R files for non-ASCII characters ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... WARNING
Error in assign("KEGGserver", SOAPServer("http://soap.genome.ad.jp/keggapi/request_v5.0.cgi"), :
could not find function "SOAPServer"
Error: .onLoad failed in 'loadNamespace' for 'KEGGSOAP'
Execution halted
A namespace must be able to be loaded with just the base namespace loaded:
otherwise if the namespace gets loaded by a saved object, the session will
be unable to start.
Probably some imports need to be declared in the NAMESPACE file.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating KEGGSOAP-Ex.R ... OK
* checking examples ... OK
* creating KEGGSOAP-manual.tex ... OK
* checking KEGGSOAP-manual.tex ... OK
WARNING: There was 1 warning, see
/Users/biocbuild/1.9d/Rpacks/KEGGSOAP.Rcheck/00check.log
for details
KEGGSOAP.Rcheck/00install.out:
* Installing *source* package 'KEGGSOAP' ...
** R
** preparing package for lazy loading
Loading required package: XML
Loading required package: SSOAP
Loading required package: RCurl
** help
>>> Building/Updating help pages for package 'KEGGSOAP'
Formats: text html latex example
KEGGserver text html latex
get.genes.by.motifs text html latex example
get.genes.by.organism text html latex example
get.genes.by.pathway text html latex example
get.motifs.by.gene text html latex example
get.paralogs.by.gene text html latex example
get.pathways.by.genes text html latex example
getBestNeighbors text html latex example
list.organisms text html latex example
mark.pathway.by.objects text html latex example
** building package indices ...
* DONE (KEGGSOAP)