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Package 51/319HostnameOS / ArchBUILDCHECKBUILD BIN
BSgenome 1.12.5
H. Pages
Bioconductor Changelog
Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/BSgenome
Last Changed Rev: 42410 / Revision: 42512
Last Changed Date: 2009-10-15 10:46:38 -0700 (Thu, 15 Oct 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  ERROR  skipped 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  WARNINGS  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  WARNINGS [ OK ]
pelham Mac OS X Leopard (10.5.8) / i386  OK  WARNINGS  OK 
Package: BSgenome
Version: 1.12.5
Command: /Users/biocbuild/BBS/utils/build-universal.sh BSgenome_1.12.5.tar.gz /Library/Frameworks/R.framework/Versions/2.9/Resources/bin/R BSgenome.buildbin-libdir
StartedAt: 2009-10-20 19:24:43 -0700 (Tue, 20 Oct 2009)
EndedAt: 2009-10-20 19:24:54 -0700 (Tue, 20 Oct 2009)
EllapsedTime: 11.0 seconds
RetCode: 0
Status: OK
PackageFile: BSgenome_1.12.5.tgz
PackageFileSize: 474.1 KiB

Command output

                INSTALLATION WITH 'R CMD INSTALL --preclean --library=BSgenome.buildbin-libdir BSgenome_1.12.5.tar.gz'

* Installing *source* package ‘BSgenome’ ...
** R
** inst
** preparing package for lazy loading

Attaching package: 'IRanges'


	The following object(s) are masked from package:base :

	 cbind,
	 duplicated,
	 order,
	 pmax,
	 pmax.int,
	 pmin,
	 pmin.int,
	 rank,
	 rbind,
	 rep.int,
	 sapply,
	 sort,
	 table,
	 unique 

** help
*** installing help indices
 >>> Building/Updating help pages for package 'BSgenome'
     Formats: text html latex example 
  BSParams-class                    text    html    latex
  BSgenome-class                    text    html    latex   example
  BSgenomeForge                     text    html    latex   example
  GenomeData-class                  text    html    latex   example
  GenomeDataList-class              text    html    latex   example
  GenomeDescription-class           text    html    latex   example
  available.genomes                 text    html    latex   example
  bsapply                           text    html    latex   example
  gdapply                           text    html    latex
  getSeq                            text    html    latex   example
  injectSNPs                        text    html    latex   example
  strand                            text    html    latex   example
** building package indices ...
* DONE (BSgenome)